Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amuc_1920 |
Symbol | |
ID | 6275329 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Akkermansia muciniphila ATCC BAA-835 |
Kingdom | Bacteria |
Replicon accession | NC_010655 |
Strand | + |
Start bp | 2331076 |
End bp | 2331825 |
Gene Length | 750 bp |
Protein Length | 249 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 642613980 |
Product | hypothetical protein |
Protein accession | YP_001878514 |
Protein GI | 187736402 |
COG category | [S] Function unknown |
COG ID | [COG3698] Predicted periplasmic protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 37 |
Fosmid unclonability p-value | 0.00295043 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGCTTTTTC TGCGCCTGCT TCCCCTGATA TTGTGCTTTT CCGGCCTGGT TCACGCAGAA CACCGCGTCT TCACCAGGAA GGACGGATTT TTGTCCATGC GGGACAAGCT GAACGTGTAT TTTTTCCGTT CTGATACGCA CCGCCTGCTG GTAAGGGATG AAGGGAGCGT CAAAACGCCC CGGTACGGCT CCCTGGACAA GGCCATGAGG AAAAGCCCCT GCGTGGCCGG AGTCAACGGA GGATTCTTCA GCGCAGACGC GGGGGGAACT CCCCTGGGCC TGGTCGTCCA GGACGGCAAA CGGCTTTCTC CGCTGGCCAC GGGGTCCTTC GCTGTTTCCG GTGTCGTTTA CGAAGGAGGC AGAGACGGAT TAACCCTGGT CCGCAGTTCC GTGCTGAGGC GCATGAGAAG ACTGCCGGCC ATGCAGGCGG CTATCCAAGG GGGGCCCTTT CTGGTGGAGA ACGGCTCCGC CGTAAAAGGG CTTAACGCGC AGAAGTCCAC CTACCGCACC TTCATTGCCA CGGACGGCGG CAGGAGGTGG TGCATCGGCG TTTCCTCCTC CCTGACTCTG AAGGAGCTGG CAGCCTGGCT GGCGGCTCCC GGGGCATTGG GGAATTTCCG GGTGGAAACG GCCCTGAACC TGGACGGCGG CTCTTCTTCC GCCTTCTGGT GCCATGAAAC AGGCATTTCC TACCCTGCGT TCAAACAAGT CAGGAATTAT CTGGGCGTAG CCCCCGTGGA ACACCGGTAA
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Protein sequence | MLFLRLLPLI LCFSGLVHAE HRVFTRKDGF LSMRDKLNVY FFRSDTHRLL VRDEGSVKTP RYGSLDKAMR KSPCVAGVNG GFFSADAGGT PLGLVVQDGK RLSPLATGSF AVSGVVYEGG RDGLTLVRSS VLRRMRRLPA MQAAIQGGPF LVENGSAVKG LNAQKSTYRT FIATDGGRRW CIGVSSSLTL KELAAWLAAP GALGNFRVET ALNLDGGSSS AFWCHETGIS YPAFKQVRNY LGVAPVEHR
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