Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amuc_1883 |
Symbol | |
ID | 6275765 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Akkermansia muciniphila ATCC BAA-835 |
Kingdom | Bacteria |
Replicon accession | NC_010655 |
Strand | + |
Start bp | 2288115 |
End bp | 2289485 |
Gene Length | 1371 bp |
Protein Length | 456 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 642613944 |
Product | beta-lactamase domain protein |
Protein accession | YP_001878478 |
Protein GI | 187736366 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG1236] Predicted exonuclease of the beta-lactamase fold involved in RNA processing |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 66 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCAGTT TTACCAATAT CAGCGGGGCC GAGGAAATTG GGGCCAATTG CTATTTGCTT GAGATGGACG GCACCAGGAT TGTGCTTGAC AGCGGGATGC ACCCCAAGAA GGAGGGGAAG GCGGCCATGC CGGATTTTGA TTCCCTGGAA CCCAATTCCG TGGAAGCCGT TTTTTTAAGC CATTCCCACC TGGACCATCT GGGAACGCTG CCTGTGCTTC AGGAGAAACA GCCAGCGGCG GAGGTGTTCA TGACGCCCGC CGCGGCAGCC CTGTCTGAAG TGATGCTGCA TAATTCCGTG AATGTGATGA GCGCCAAGAG GCTGGACCTG GGCATTGTGG AGTATCCTTT TTTCACCCAT AATGATCTGG ACAGATTGAG CGACGCCTGG CATGCCAAGT CCTGCAATGA AGTGTTTCGC GTGGGCTTCC GCCAGAACGT GCTGGCCACG TTTTACGATG CCGGGCACAT CCTGGGGTCT GCCGGCGTGA TGCTGGAGGG TGAGAGCGGC CATACCGTAT TTTATACGGG GGACGTGCAG TTTGAAGACC AGAGCATGAT TCCCGGGGCT GATTTTCCGG AATCCGGCGT AGATACGCTG GTTATGGAGT GCACGCGCGG CGGTTTCCAG CGCAGCGCCC ACTATTCCCG GCCGGAAGAG ATGGTGAGGT TCGGGAAAGC GATTGCGGAG ACGCTGGAAC GCGGCGGCGC CGTACTGATT CCGGTATTCG CCATCGGCAA GAGCCAGGAG ATGCTGTTCA ACATTCACCG TTTCAAGCAG CAGGGGGTGA TTCCCGCCAA TACTCCCGTG TACTTCGGCG GGCTGAGCGC GAAAGTTTCC CTGTTGTACG ACCGTTTTGC CGGGTTGACG CGCAGGCATG ACCATGAATT CAAGCTGAAG GAGGAGATTC AGACCGTGCC CCTTCCGCGC AAGGGAAAAG CTCCGCTGGT GTGTTCCCCG GGGAATATTT ATGTGGTGTC CAGCGGCATG ATGACGGAAA ATACGCTTTC CAACGTCATG GCGGAGCAGG TTCTTCCCCA GGAGAAGAAT GCTATTTTGT TCGTAGGATA TGCGGATCCT GATTCTCCGG CGGGACTGCT GAAGGCAACT CCTGAAGGGG AACTGGTGAA AATGAGGCCC AACGGGCAGC CGGTGCGCCG CAAGTGCACC GTGGACTGTT TTGATTTTTC CGGGCATGCC ACCCGGGACT CCCTGGTTAA TTATGCCGTG AAGCTGAACC CCAGGCAGGT GGTTCTGGTG CACGGGGACC CGGATGCCGT GGAGTGGATG CACCACACGC TATCCGCCAA AATGCCTGAT TCCACCATCG TCGTTCCTGA GCCGGGACGC CGCTACACTT TCGAGCCATG A
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Protein sequence | MISFTNISGA EEIGANCYLL EMDGTRIVLD SGMHPKKEGK AAMPDFDSLE PNSVEAVFLS HSHLDHLGTL PVLQEKQPAA EVFMTPAAAA LSEVMLHNSV NVMSAKRLDL GIVEYPFFTH NDLDRLSDAW HAKSCNEVFR VGFRQNVLAT FYDAGHILGS AGVMLEGESG HTVFYTGDVQ FEDQSMIPGA DFPESGVDTL VMECTRGGFQ RSAHYSRPEE MVRFGKAIAE TLERGGAVLI PVFAIGKSQE MLFNIHRFKQ QGVIPANTPV YFGGLSAKVS LLYDRFAGLT RRHDHEFKLK EEIQTVPLPR KGKAPLVCSP GNIYVVSSGM MTENTLSNVM AEQVLPQEKN AILFVGYADP DSPAGLLKAT PEGELVKMRP NGQPVRRKCT VDCFDFSGHA TRDSLVNYAV KLNPRQVVLV HGDPDAVEWM HHTLSAKMPD STIVVPEPGR RYTFEP
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