| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amuc_1836 |
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| Symbol | |
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| ID | 6273734 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Akkermansia muciniphila ATCC BAA-835 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010655 |
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| Strand | - |
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| Start bp | 2232176 |
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| End bp | 2232769 |
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| Gene Length | 594 bp |
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| Protein Length | 197 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 642613900 |
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| Product | RNA polymerase, sigma-24 subunit, ECF subfamily |
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| Protein accession | YP_001878435 |
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| Protein GI | 187736323 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 66 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATGAAG CACAAGACAT GCCGCCTGCG GAACCAGACG AAGATGCCAA GCTGATGCTG
AGGGTCAGGA ATGGCGACGC TTCCGCCATG GAAATGCTGG TCCGCAAACA CCAGAATTCC
GTATATGCGA CGGTGGCCCG TATGCTGAAC AACGGTCCGG AGACAGAGGA CATCGCCCAG
CAGGTATTCA TCCGCATCTG GAAGGGAGCC GGGAATTATG AACCTTCCGC ACGGTTTACC
ACCTGGATGT TCACCATCCT GCGCAATCTG GTGTTCAATG AAGTGCGCCG CCAGAAGCGC
AAGCCCACCA CCTCCGCAGA CGCCATGGAG GAGGAAGGAG GCATGGCCGT GTTTCTGGAA
CCTTCCCAGA CCCCGGACGA AGCACTGGAA CATACGGAAC TCCAGCACGC CGTGGACGCG
GCAATCGCCG CTCTGCCGGA AAAGGCGCGG CTGGCCGTCC AACTGCGCCG TTTCGAAAAC
ATGCCCTATG AGGAAATAGC CCGGGCGCTG GATATGACGG TTCCCGCTAC CAAAAGCCTG
CTGTTCCGCG CCAGAAACAT GCTGAAGGAG GCTCTTGCTT CCTTTTTATC CTGA
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| Protein sequence | MDEAQDMPPA EPDEDAKLML RVRNGDASAM EMLVRKHQNS VYATVARMLN NGPETEDIAQ
QVFIRIWKGA GNYEPSARFT TWMFTILRNL VFNEVRRQKR KPTTSADAME EEGGMAVFLE
PSQTPDEALE HTELQHAVDA AIAALPEKAR LAVQLRRFEN MPYEEIARAL DMTVPATKSL
LFRARNMLKE ALASFLS
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