Gene Amuc_1797 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmuc_1797 
Symbol 
ID6274680 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAkkermansia muciniphila ATCC BAA-835 
KingdomBacteria 
Replicon accessionNC_010655 
Strand
Start bp2184205 
End bp2185077 
Gene Length873 bp 
Protein Length290 aa 
Translation table11 
GC content55% 
IMG OID642613861 
Producthypothetical protein 
Protein accessionYP_001878396 
Protein GI187736284 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.227958 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value0.00253593 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGACCAAGA GAATGATTAA AAATGCTTCC TACGAAGGGG AACGTCCCCT GTTCGCTTCC 
CGCCATCTTA GGCTGGAAGA CGTCATTATT TATCCGGGGG AATCCGCCCT GAAGGAATGT
TCCGACATTG AAGCTGTGCG GTGCGAGTTC CGGGGGAAGT ACCCTTTCTG GCACAATGAC
GGGCTGCTGG TGGAACATTG CCTGTTCAGG GAAGGCGCCC GGGCCGCCAT CTGGTATTCC
CGGAATCTGC ACATGAAGGA TACCCGCGTG GAAGCGCCCA AGATGTTCCG TGATATGGAC
GGGATGGTTC TGGAGAACGT CGTTCTGACG GATGCTCTGG AATGCTGCTG GCACTGCCGG
AATGCGAAGC TTCGCGGCGT GCAGGCGGAG CATGGGGATT ACCTGTTCAT GCACGGGGAG
AATATAGATG TTGACGGCTT CCGCCTGAAC GGAAATTACT CTTTCCAATA TTGCAGGAAT
GTGGTGATAC GGAATGCGGA AATCCATTCC AAGGACGCTT TCTGGAATAC GGAGGACGTG
ACGGTGTACG ATTCCGTGGT GGACGGGGAA TATCTGGGCT GGCATTCCAG GAACCTTCGT
CTGGTGAATT GCCGCATTTC CGGCACGCAG GCGTTGTGCT ACGCGGAAAA CCTGGTTCTG
GAGAATTGCA CGCTCGGAGA GGATGCGGAT CTCTGCTTTG AGTATTCCTC CGTGCATGCG
GAAATCAAGG GGCGTGTGCA CAGCGTCAAA AATCCGCGCA GTGGCCGCAT TGTTGCGGAA
GAGTACGGGG ATATTATTCT GGACGAGCAT TGCAAGGCTC CTGCCAATTG CTCCATTGAA
ACGGGAAAAG CCCAATCCGG AGAAGCCGCA TGA
 
Protein sequence
MTKRMIKNAS YEGERPLFAS RHLRLEDVII YPGESALKEC SDIEAVRCEF RGKYPFWHND 
GLLVEHCLFR EGARAAIWYS RNLHMKDTRV EAPKMFRDMD GMVLENVVLT DALECCWHCR
NAKLRGVQAE HGDYLFMHGE NIDVDGFRLN GNYSFQYCRN VVIRNAEIHS KDAFWNTEDV
TVYDSVVDGE YLGWHSRNLR LVNCRISGTQ ALCYAENLVL ENCTLGEDAD LCFEYSSVHA
EIKGRVHSVK NPRSGRIVAE EYGDIILDEH CKAPANCSIE TGKAQSGEAA