Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amuc_1797 |
Symbol | |
ID | 6274680 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Akkermansia muciniphila ATCC BAA-835 |
Kingdom | Bacteria |
Replicon accession | NC_010655 |
Strand | + |
Start bp | 2184205 |
End bp | 2185077 |
Gene Length | 873 bp |
Protein Length | 290 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 642613861 |
Product | hypothetical protein |
Protein accession | YP_001878396 |
Protein GI | 187736284 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.227958 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 36 |
Fosmid unclonability p-value | 0.00253593 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGACCAAGA GAATGATTAA AAATGCTTCC TACGAAGGGG AACGTCCCCT GTTCGCTTCC CGCCATCTTA GGCTGGAAGA CGTCATTATT TATCCGGGGG AATCCGCCCT GAAGGAATGT TCCGACATTG AAGCTGTGCG GTGCGAGTTC CGGGGGAAGT ACCCTTTCTG GCACAATGAC GGGCTGCTGG TGGAACATTG CCTGTTCAGG GAAGGCGCCC GGGCCGCCAT CTGGTATTCC CGGAATCTGC ACATGAAGGA TACCCGCGTG GAAGCGCCCA AGATGTTCCG TGATATGGAC GGGATGGTTC TGGAGAACGT CGTTCTGACG GATGCTCTGG AATGCTGCTG GCACTGCCGG AATGCGAAGC TTCGCGGCGT GCAGGCGGAG CATGGGGATT ACCTGTTCAT GCACGGGGAG AATATAGATG TTGACGGCTT CCGCCTGAAC GGAAATTACT CTTTCCAATA TTGCAGGAAT GTGGTGATAC GGAATGCGGA AATCCATTCC AAGGACGCTT TCTGGAATAC GGAGGACGTG ACGGTGTACG ATTCCGTGGT GGACGGGGAA TATCTGGGCT GGCATTCCAG GAACCTTCGT CTGGTGAATT GCCGCATTTC CGGCACGCAG GCGTTGTGCT ACGCGGAAAA CCTGGTTCTG GAGAATTGCA CGCTCGGAGA GGATGCGGAT CTCTGCTTTG AGTATTCCTC CGTGCATGCG GAAATCAAGG GGCGTGTGCA CAGCGTCAAA AATCCGCGCA GTGGCCGCAT TGTTGCGGAA GAGTACGGGG ATATTATTCT GGACGAGCAT TGCAAGGCTC CTGCCAATTG CTCCATTGAA ACGGGAAAAG CCCAATCCGG AGAAGCCGCA TGA
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Protein sequence | MTKRMIKNAS YEGERPLFAS RHLRLEDVII YPGESALKEC SDIEAVRCEF RGKYPFWHND GLLVEHCLFR EGARAAIWYS RNLHMKDTRV EAPKMFRDMD GMVLENVVLT DALECCWHCR NAKLRGVQAE HGDYLFMHGE NIDVDGFRLN GNYSFQYCRN VVIRNAEIHS KDAFWNTEDV TVYDSVVDGE YLGWHSRNLR LVNCRISGTQ ALCYAENLVL ENCTLGEDAD LCFEYSSVHA EIKGRVHSVK NPRSGRIVAE EYGDIILDEH CKAPANCSIE TGKAQSGEAA
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