| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amuc_1775 |
|---|
| Symbol | |
|---|
| ID | 6275631 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Akkermansia muciniphila ATCC BAA-835 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010655 |
|---|
| Strand | + |
|---|
| Start bp | 2160807 |
|---|
| End bp | 2161637 |
|---|
| Gene Length | 831 bp |
|---|
| Protein Length | 276 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 642613838 |
|---|
| Product | aldo/keto reductase |
|---|
| Protein accession | YP_001878374 |
|---|
| Protein GI | 187736262 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0656] Aldo/keto reductases, related to diketogulonate reductase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.0360255 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 52 |
|---|
| Fosmid unclonability p-value | 0.42247 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATGGAAC ATTCAGTAAT TTTTCCGGAC CATCGGAAGG TTTGCGCCCT GGGGCAGGGA
ACCTGGAAAA TGGGAAAGTC AGCGTTGAGG GAAGCCGATG AAATAGATGC TTTGCGCGCC
GGCATTGAGC TGGGCATGAG CGTAGTGGAT ACGGCGGAGA TGTATGGCAA CGAGGAAATG
GTGGGAGCGG CAATCCGCGG TTTGCGCGAC CGTGTTTTCC TGGTTACCAA GGTGTTGCCC
GGCAACGCCA GCAGGACAGG AACCAAAGCG GCCTGCGAAC GGAGCCTGAA CAGGCTGAAG
ACGGATTACG TGGATTTGTT TCTGCTTCAC TGGGGAGGTC CCCATCCCAT TGAAGATACG
GTTGCTTCAA TGATTGAGCT GCAGCAGGAG GGAAAAATAA AAGCATGGGG CGTCAGCAAT
ATGGACGTTC CGGAAATGGA GCGGTTTTAC GCCGTCCCGG GAGGAGTTTC CTGCGCCGCC
AACCAGATTC TTTATAATCT GGCCCATCGA GGTGTGGAGT ACGATTTGCT GCCATGGTGC
CGGGAACGCC ACCTTCCCGT GATGGCCTAT TCGCCTGCGG ATGAAGGGCG GCTTTCCCGT
AATCCGGTGC TGATGGAGAT TGCGCAGAAG CATGAGGCCA CCCCGGTGCA GATTGCCCTG
GCCTGGATTT TGCGCTGCCC TGGAATGATT GCGATCCCCA AAGCCGGTTC CGTCACGCAT
GTGCAGGAAA ATTACCGGAG TTTGTCCATC AGGCTGACTG CGGAAGATGT GGATTTGCTG
GATGGGGCTT TTCCGCCCCC GGTCAGAAAG GTGCATCTGG ATTCCTGGTA A
|
|---|
| Protein sequence | MMEHSVIFPD HRKVCALGQG TWKMGKSALR EADEIDALRA GIELGMSVVD TAEMYGNEEM
VGAAIRGLRD RVFLVTKVLP GNASRTGTKA ACERSLNRLK TDYVDLFLLH WGGPHPIEDT
VASMIELQQE GKIKAWGVSN MDVPEMERFY AVPGGVSCAA NQILYNLAHR GVEYDLLPWC
RERHLPVMAY SPADEGRLSR NPVLMEIAQK HEATPVQIAL AWILRCPGMI AIPKAGSVTH
VQENYRSLSI RLTAEDVDLL DGAFPPPVRK VHLDSW
|
|---|
| |