Gene Amuc_1706 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmuc_1706 
Symbol 
ID6274347 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAkkermansia muciniphila ATCC BAA-835 
KingdomBacteria 
Replicon accessionNC_010655 
Strand+ 
Start bp2072105 
End bp2072758 
Gene Length654 bp 
Protein Length217 aa 
Translation table11 
GC content51% 
IMG OID642613766 
Productprotein of unknown function DUF218 
Protein accessionYP_001878305 
Protein GI187736193 
COG category[S] Function unknown 
COG ID[COG2949] Uncharacterized membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.080419 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones8 
Fosmid unclonability p-value1.73003e-16 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCTGCTGG CGTTGAAAAT AGCAGGAGGC ATGTTTGCGG GAGCGGTTGT GGTATGCGTT 
GCCGCAGAAT GGTACATTTA TTCCGTTTCA GAGGGCAGGA TTGTTGAGCA TTCCAGGGAT 
GTTCCCGTTC GTGCTCCTGT TCTGGTGTTA GGATGCTCCC CAACATTCAT GGGGAGCCCT 
AACGGATATT TCCATAACAG GATGGATACG GCCTCGGAAC TTTGGAAAGA TGGAAAAGCA 
ACGGTTTTCA TCGTTTCCGG AGATAATAGT TCTCATGCTT ACAATGAACC GGAATGGATG 
AAACAGGCTC TGGTGGAACG TGGCGTTCCA GAGGAACGGA TTGTATGTGA CTTTGCGGGA 
TTGCGGACTT TGGATTCTGT CGTGAGGATG AAGGAAATTT TCGGCGTTTC GACGATGATT 
GTTGTTTCTC AGGAATTTCA TAATGAACGC GCCCTGGCAA TCGCAGCGCA TGAGGGGATG 
GCGGCCTGGG CCGTCAGCGC GCCGGATGTT CCCAACCGCC GTTCCCGTAT GAAAAGCTGG 
TTCAGGGAGC GTGCGGCCCG CGTATGGATG ATGCTGGACT TGTGGGTTTG GAGCCGTGAA 
CCCCGTTTTT TGGGAGAACC TGTGGTTTTG CCGGAAATAA AAGAGGAAAA ATGA
 
Protein sequence
MLLALKIAGG MFAGAVVVCV AAEWYIYSVS EGRIVEHSRD VPVRAPVLVL GCSPTFMGSP 
NGYFHNRMDT ASELWKDGKA TVFIVSGDNS SHAYNEPEWM KQALVERGVP EERIVCDFAG 
LRTLDSVVRM KEIFGVSTMI VVSQEFHNER ALAIAAHEGM AAWAVSAPDV PNRRSRMKSW 
FRERAARVWM MLDLWVWSRE PRFLGEPVVL PEIKEEK