| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amuc_1686 |
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| Symbol | |
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| ID | 6274435 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Akkermansia muciniphila ATCC BAA-835 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010655 |
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| Strand | + |
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| Start bp | 2048214 |
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| End bp | 2050556 |
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| Gene Length | 2343 bp |
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| Protein Length | 780 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 642613745 |
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| Product | Beta-galactosidase |
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| Protein accession | YP_001878285 |
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| Protein GI | 187736173 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1874] Beta-galactosidase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.00233252 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 48 |
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| Fosmid unclonability p-value | 0.321684 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAATTAT CCTTTTTCTC CGTTCTGCTT CTGGCAGGGC ATCTTTGTGC GGCTGCTCCC
ATGCCTTTGC CGGAATCCAA TGACGGAGCC AGGCATGTCT TCTCTACTAA TCAGGAAAAT
TTTTTGATGG ACGGAAAGCC CGTCAAAATC ATTTCCGGGG AAATGCATTA TCCTCGCGTG
CCGCGCCAGC ACTGGAAGGA CAGGTTCCAG CGCATAAAGG CCATGGGCAT GAATACCGTC
TGCACTTATC TGTTCTGGAA CGTGCATGAA CCGGAACCCG GCAAATGGGA CTTTTCCGGC
AATCTGGATT TTGTGGAATT CATCAAGGAG GCGCAGAAGG CCGGCCTGTG GGTCATTGTG
CGTCCCGGGC CCTATGTGTG CGCGGAATGG GAATTCGGCG GATTTCCCGG CTGGCTGCTG
AAGGATGAAG ATTTGAAAGT CCGTTCCCAG GATCCCCGCT TCCTGGAACC GGCCATGGCT
TATCTTAAAA AAGTCTGTTC CATGCTGGAA CCTCTGCAGA TTACCAAGGG AGGCCCCATC
ATCATGGCCC AGGTGGAAAA TGAATACGGC TCCTATGGTT CTGACAAGGA TTACGTGAAA
AAGCATCTGG ACGTTATCCG GAAAGAACTT CCGGGAGTTG TTCCCTTCAC GTCGGACGGC
CCGAACGACT GGATGATCAA GAACGGCACG CTTCCGGGCG TTGTTCCCGC CATGAATTTC
GGCGGCGGAG CCAAGGGCGC TTTTGCGAAT CTGGAGAAGC ACAAGGGCAA AACGCCCCGC
ATCAACGGCG AATTCTGGGT GGGCTGGTTT GACCACTGGG GCAAGCCCAA GAATGGCGGC
AGTACGGAAG GTTTCAACCG AGACCTGAAG TGGATGCTGG AAAATAACGT TTCCCCCAAC
CTATTCATGG CGCATGGGGG GACCTCCTTC GGCTTCATGA ACGGGGCGAA CTGGGAAGGC
GCCTACACGC CGGATGTAAC CAATTACGAC TACGGCGCCC CCATTTCCGA AAACGGAACC
CTGACGGACC GCTACCGCAC CTTCCGCCAG ACTATTCAGG ATTATTACGG TGATACGTAC
AAGCTTCCCG AACCTCCCGC CCAGCCGGAA ATGATGGAGC TGCCTCCCAT CACGTTTACG
GAAACAGCCG GCATGTTCTC CCGCCTGCCG CAGCCCGTCA TCCGCAAGGA GCCCGTCCAC
ATGGAAGCCT TGGGGCAAAG CCTGGGCTTC ATCCTGTACC GGACAAAGGT GAACGGCCCG
GTGAAAGGAG AGCTGAAGAT GAACAACATG CAGGACCGCG CCATCGTTTA CGTGGACGGC
AAGAGGCAGG GGGCGGCGGA CCGCCGTTAC AAGCAGGATT CCTGTGACAT TGTCATTCCC
TCCGGACTTC ACACGGTGGA CATTTTTGTG GAAAACATGG GCCGCATCAA CTTCGGCGGC
CAGATACAGG GCGAGCGCAA GGGCATCCGG GGCCCCATTA CGCTGGACGG CAAAAAGCTG
GAAAACTTCC TTATCTACAA CTTCCCGTGC AAGGGGGTGG AGCTTATTCC CTTCTCCGGC
AAGAAGCCGG CGGGCGACCA GCCCGTGTTC CACCGCGGGT ATTTCAACGT TTCCAATCCC
AAGGATACCT ACTTGGATAT GCGGGACGGC TGGAAGAAAG GCGTCGTGTG GGTGAATGGA
CGCAATCTGG GCCGCTTCTG GTTTATCGGC TCCCAGCAGG CTCTTTATTG CCCCGGAGAA
TACCTGAAGC CCGGGAAAAA TGAAATCGTG GTGCTGGACG TGGACGGAGG TTCCGGCACG
GTGAAGGGTG TGAAGGAAGC CATTTATGAA GTCAACAGGG ACCCCGCCAT GGCGGATGTC
TTCCGCGTGG GCAAACCTGT GGCCCCCGCT GCCGGCCAGC TGGTGCACAA GGGTTCCTTC
GCCAAGGGGG CGGACCAGCA GGAAATCAAA TTCCGCGCTC CTGTCCAGGC CCGTTACATA
GCTATTGTCA GTAAAAACGC TCATGACAAC GGCCCCCATG CCGCCATTGC GGAGCTGAAC
TTCCTGGATG CCTCCGGCAA TCTGCTCCCC CGCGAACAGT GGTCCGTGGT TTATGCGGAT
TCCCATGAAA CGACGGGAGA AGCCGCCCAG GCGGGACTGG TGATGGACAA CCAGCCCACC
ACCTACTGGC ATACCAAGTG GCAGGGGGAC AACCCCAGGC ATCCGCACAT GATCGTGCTG
GATCTGGGCA AGGTGCAGAA ACTTTCAGGA TTCCGCTACC TGCCGCGCCA GGACCGGGAA
AACGGCCGCA TCAAGGACTA TGAAGTCTAT GCGTCTCCCA AGCCGTTCAA GCCTGCCAAG
TAA
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| Protein sequence | MKLSFFSVLL LAGHLCAAAP MPLPESNDGA RHVFSTNQEN FLMDGKPVKI ISGEMHYPRV
PRQHWKDRFQ RIKAMGMNTV CTYLFWNVHE PEPGKWDFSG NLDFVEFIKE AQKAGLWVIV
RPGPYVCAEW EFGGFPGWLL KDEDLKVRSQ DPRFLEPAMA YLKKVCSMLE PLQITKGGPI
IMAQVENEYG SYGSDKDYVK KHLDVIRKEL PGVVPFTSDG PNDWMIKNGT LPGVVPAMNF
GGGAKGAFAN LEKHKGKTPR INGEFWVGWF DHWGKPKNGG STEGFNRDLK WMLENNVSPN
LFMAHGGTSF GFMNGANWEG AYTPDVTNYD YGAPISENGT LTDRYRTFRQ TIQDYYGDTY
KLPEPPAQPE MMELPPITFT ETAGMFSRLP QPVIRKEPVH MEALGQSLGF ILYRTKVNGP
VKGELKMNNM QDRAIVYVDG KRQGAADRRY KQDSCDIVIP SGLHTVDIFV ENMGRINFGG
QIQGERKGIR GPITLDGKKL ENFLIYNFPC KGVELIPFSG KKPAGDQPVF HRGYFNVSNP
KDTYLDMRDG WKKGVVWVNG RNLGRFWFIG SQQALYCPGE YLKPGKNEIV VLDVDGGSGT
VKGVKEAIYE VNRDPAMADV FRVGKPVAPA AGQLVHKGSF AKGADQQEIK FRAPVQARYI
AIVSKNAHDN GPHAAIAELN FLDASGNLLP REQWSVVYAD SHETTGEAAQ AGLVMDNQPT
TYWHTKWQGD NPRHPHMIVL DLGKVQKLSG FRYLPRQDRE NGRIKDYEVY ASPKPFKPAK
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