| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amuc_1666 |
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| Symbol | |
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| ID | 6275704 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Akkermansia muciniphila ATCC BAA-835 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010655 |
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| Strand | + |
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| Start bp | 2013730 |
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| End bp | 2017599 |
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| Gene Length | 3870 bp |
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| Protein Length | 1289 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 642613724 |
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| Product | glycoside hydrolase family 2 TIM barrel |
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| Protein accession | YP_001878265 |
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| Protein GI | 187736153 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3250] Beta-galactosidase/beta-glucuronidase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 0.114513 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGACGG TACGCGCGTT TCTGTTTTCC GTGATGTGTC TGGCTCCGGC TCTTCCCCTG
CTGGGGGATG TTCCGGATTG GGAAAATGAA GAGGTGACGG GAATCAATAA GGAGGCTCCC
CGAGCCTCCG TTTTTCCGGC ATCGGATAAA ACGTTGAGCT TGAACGGGGA TTGGAAGTTC
AAATTTTCCA TGACTCCGGA CGAGAGGCCT GCCGATTTCT TCAATCCCTC TTATTCCGTT
TCCGGATGGG ATACGGTCAA GGTTCCTTCC AACTGGCAGC TTTACGGTTA TGGAACGGCC
ATTTACACGA ATGTTCCCTA TCCATTCAAG CCGAATCCTC CCAAGGTAAT GGGGGAACCG
CCCAAGAACT GGCCGGCGTA CAGGGAGCGT AATTCCGTGG GTTCCTACCG CCGGGATTTC
AATTTGCCCG TTTCCTGGAA GGGAGAGCAG GTGATGATCC GGTTTGACGG GGTGGAGTCC
GCCTTTTATG TGTGGGTAAA TGGCCGTCAA GTCGGCTATT CCGAAGATTC CTATACAGGG
GCGGAGTTTG ACCTTACTCC CTATGTCAGG CCCGGCAGGA ATACGATTGC CGTGGAAGTA
TACCGCTGGA GCGACGGTTC TTACCTGGAG GACCAGGATT TCCTGCGCCT TTCCGGCATT
TTCCGGGACG TGACCCTGTT TGCCCAGCCG CAGACGCACG TGCGTGACCT GTTCCTGAAG
GCCGGACTGG ACAGGGAGGA TTACACAACC GGGGTACTGG ACGGAACGTT CACCATCCGC
AATTCCGGTA AAAAGGATAT TCCCGCCGGC ATGAAGCTGA ATTATTCCAT CGACGGGATT
TCCACCAAAT TGAACTGGGA GGGCAGGAAC GGTTCCGGCC GCGTGCAGAC GGACAACAGG
GGAAGGCTGG ATTCCGGAAC GCTGGAGGTT CCCTCCATTC CCTCCGGAGG CGAGGTGCAG
ATTTCCCTGA ACAGGAAATT TCCCGGTGTG AAGCCATGGA CGGCGGAAAC GCCCAACCTG
TACAGGGTGA CTTATTCTCT GAATGGAAAG GATACCCGTT CCGTCAATAT CGGGTTCCGT
TCCGTGGAGA TTGCGGATAA CGGCGCCGTG CTGATTAACG GCAGAGCCGT CAAGTTCAAG
GGTGTCAACC GCCATGAAGC CCATCCCGAT TACGGGCGCG CCATTCCGCG GGAAGTGATG
GAAAAGGACG TGCAGATTAT CAAGGCGCAT AATATCAATA CCGTCCGTTG TTCCCACTAT
CCCAATCATC CTTATTTTTA TGAGTTGTGC GACCGCTACG GCCTGTACGT GATGGACGAA
GCCAACTGCG AAGCCCACGG CATCCGCAAT AGCAGCATGG ATATTTCCCG GAAGCCTTCC
TGGAAGAAAG CCCATGTGGA GCGCAATATG AGCATGGTGC ATCGTTCCAA GAACCACCCT
TCCATTGTTT TCTGGTCCCT GGGCAATGAG TCCGGAAACG GTCCCAATTT TGAGGCGGCA
GCGGCGGCTG TCAGGGCTTA TGACACTACG CGGCCCCTCC ATTACTGCGA ATTTCCGCAC
GGCCACAAGG CCGTGGATAT GGATTCCGCC ATGTATCCGC CCGTGGACCG GGTGGAAAAC
TGGGGGAAGC AGAAAACTTC CCGCCCCTTT TTCGTGTGCG AATATGCCCA CTCCATGGGG
AATGCCCTGG GGAATTTCAA GGAGTACATG GATGCCTTCG AGTCTTCCCC GCGCATGGTG
GGCGGGGCCA TCTGGGATTT CGTGGACCAG TCCCTCCGCG CCAATCCTGC CGGAAACGGC
ATTTACAAGC CCGCCCCTTT CAAGGGAGTA ACACAGGCTT ACGGCGGCAT GTTCGGAGAC
AGGCCCAACC AGGCCAATTT CTGCGACAAC GGCATTATTC TTGGCAACCG GAACACCACG
GCCAAGACGA AAGAGGTGAA GAAAGTATAC CAGTACATGG CTTTTGAGCG CAAGGACGGG
TCCCTGTCCG TTCGCAACAA ATATTTCCAT AAGCCTTTGA AAGGTTATAC GCTTTATCTG
GTATCCCTTG TTCCCGGCGG CGGCCATGCC GTGGAGCGCA TGGTTCTGCC GGAGGTTCCC
CCCGGCAAAT CCGCAACGGT TAATCTGCCT TCAGCCGCTA TGCGGACCGG TTCCCTGATG
GTTCTGGCGG ATGCCCGGTT CAAGCTCCCG GAAGACGTGA AGGAACTTTC CTCCAAGCAA
CTGGAACATG TGGTGAATGA GTGCGAAGCT TACGAGTGGT TCCCGGCATC TGCAGAGAAG
GAGGTTCCCG TGCCTCCCCC GGCGGCGCTG CCTGCTGTTT CCGTGCTCCA GGGGGATTCC
GTGGCCGTGC AGGGAAAAGG TTTTTCCGCC TCCTTCAAAA ACGGGATGCT TTCCTCCCTC
CGGTATGGCG GTCGGGATTT GATTTTGCCC GGCTATCCGG TGGAGCTCCA GGCGTACCGT
TCTCCGGTGG ATAACGATGC CTGGATCAGG AGCAAGGTTG AAGGGAAAAT GAAGATGCAG
AATATGAAAG CGGAATATTC CGACGTTAAA GCTGCCGTCA TTTCCCCCGG CGTGGCCCGA
ATCACGGCAC AGTTCCGGAC GAAAGGTTCC GAGCTTGCCT TTTCCGGGGA AGTCGCGTGG
ACGGTTTTCG GCAACGGCAT TATCAATGCT TCCGTCCGAA TGTATCCCTC CGCCAAGGGA
GAAGAACTCC TTCGGCTGGG CGTCACTTTC GGGATGCCTG CCGCGTATGA CCGGGTAGAG
TACCTGGGGC TGGGACCGTG GGATAATTAC CGGGACCGCC GCACGAGCTG CTGGAAGGAC
ATTTTCCGCA CTTCCGTGGA CGATATGTTT TTTGCTTATT CCCGGCCCCA GGATATGGGC
AACCGCATGG AAACGGACTG GATAGCCTTG TCCAAACCCC AGGAGGACCA GGCTCTGTGG
GTGGGGGCCG CCTCTCCCAG GGCTCCGCTG GAGGTTTCCG TCCTGCGTTA TACGCCGAAG
GAGCTTAACG ATGCCAGGAG CCTGGACAGG CTGCCGGAGA AAAATAAAGT GATTGTGAAT
CTGGACGCTT TCCAGATGGG GCTGGGCGGC TCTTCCTGCG GGCCCCGTCC GCTGGTCAAG
TACCAGACAT TGAGCGGGGC CACAGCCCTG GGGTTTGTGC TGGCTCCCTC ATCCGCCCTG
CTGAATCTGG CGCGCACGGG GCTGGCCGTT CCCCATTCCC CTGTCATTGA ACGGGATGGG
GACGGCATGG TCAGTCTGAC TTCCTCTACG CCCGAGGCGG AGATAAAGTA TTCCGTCAAC
AAGGGGCCGG AAAAAACGTA CCGGAATCCC TTCAAGCTTC CCGAAGGGGA AGTTAGGGCC
TGGGCTGCCT CCATGAAGTC CGGCAAGGTT CCTTCCACGT CTCCCGGAGA GAGGAAATTC
CCCCTCGTCA AGGGGCAGGG CGAATGGAAA ATTCTAAGCG CTTCTTCGGA AGAGCCGGAT
ACCGGTTTCG CCCATTTTGC CATTGACGGG AATCCGGATA CCTATTGGCA TACGTCCTAT
ACGAACGGCC TGCCGGGGTT CCCCCACTCC ATTGCCGTGG ATATGGGAAC CAGAATGAAG
TTTACCGGAT TTATCTACAC GCCCAGAATG GACAAGGACA AGGGCCTCAT CAGCCAGTAC
ACGTTTTCCG TTTCCGATGA CGGTCGGAAT TGGAGGGAAG TGAAAAAAGG CCAGTTCTCC
TACCACTATA TCCGGAAGGA TCCGGCTGTT CAGCGCATCG ACTTCGGCAG GCCTGTGGAG
GCCCGCTACT TTAAGCTTGA CGCCCGGTCT CCGGTGAGGG GCGGGGAACA GAGCGCCACC
GTTGCGGAGC TGAATATCAT TACCCAATAA
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| Protein sequence | MKTVRAFLFS VMCLAPALPL LGDVPDWENE EVTGINKEAP RASVFPASDK TLSLNGDWKF
KFSMTPDERP ADFFNPSYSV SGWDTVKVPS NWQLYGYGTA IYTNVPYPFK PNPPKVMGEP
PKNWPAYRER NSVGSYRRDF NLPVSWKGEQ VMIRFDGVES AFYVWVNGRQ VGYSEDSYTG
AEFDLTPYVR PGRNTIAVEV YRWSDGSYLE DQDFLRLSGI FRDVTLFAQP QTHVRDLFLK
AGLDREDYTT GVLDGTFTIR NSGKKDIPAG MKLNYSIDGI STKLNWEGRN GSGRVQTDNR
GRLDSGTLEV PSIPSGGEVQ ISLNRKFPGV KPWTAETPNL YRVTYSLNGK DTRSVNIGFR
SVEIADNGAV LINGRAVKFK GVNRHEAHPD YGRAIPREVM EKDVQIIKAH NINTVRCSHY
PNHPYFYELC DRYGLYVMDE ANCEAHGIRN SSMDISRKPS WKKAHVERNM SMVHRSKNHP
SIVFWSLGNE SGNGPNFEAA AAAVRAYDTT RPLHYCEFPH GHKAVDMDSA MYPPVDRVEN
WGKQKTSRPF FVCEYAHSMG NALGNFKEYM DAFESSPRMV GGAIWDFVDQ SLRANPAGNG
IYKPAPFKGV TQAYGGMFGD RPNQANFCDN GIILGNRNTT AKTKEVKKVY QYMAFERKDG
SLSVRNKYFH KPLKGYTLYL VSLVPGGGHA VERMVLPEVP PGKSATVNLP SAAMRTGSLM
VLADARFKLP EDVKELSSKQ LEHVVNECEA YEWFPASAEK EVPVPPPAAL PAVSVLQGDS
VAVQGKGFSA SFKNGMLSSL RYGGRDLILP GYPVELQAYR SPVDNDAWIR SKVEGKMKMQ
NMKAEYSDVK AAVISPGVAR ITAQFRTKGS ELAFSGEVAW TVFGNGIINA SVRMYPSAKG
EELLRLGVTF GMPAAYDRVE YLGLGPWDNY RDRRTSCWKD IFRTSVDDMF FAYSRPQDMG
NRMETDWIAL SKPQEDQALW VGAASPRAPL EVSVLRYTPK ELNDARSLDR LPEKNKVIVN
LDAFQMGLGG SSCGPRPLVK YQTLSGATAL GFVLAPSSAL LNLARTGLAV PHSPVIERDG
DGMVSLTSST PEAEIKYSVN KGPEKTYRNP FKLPEGEVRA WAASMKSGKV PSTSPGERKF
PLVKGQGEWK ILSASSEEPD TGFAHFAIDG NPDTYWHTSY TNGLPGFPHS IAVDMGTRMK
FTGFIYTPRM DKDKGLISQY TFSVSDDGRN WREVKKGQFS YHYIRKDPAV QRIDFGRPVE
ARYFKLDARS PVRGGEQSAT VAELNIITQ
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