Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amuc_1645 |
Symbol | |
ID | 6274641 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Akkermansia muciniphila ATCC BAA-835 |
Kingdom | Bacteria |
Replicon accession | NC_010655 |
Strand | - |
Start bp | 1987924 |
End bp | 1988982 |
Gene Length | 1059 bp |
Protein Length | 352 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 642613705 |
Product | dihydrouridine synthase DuS |
Protein accession | YP_001878246 |
Protein GI | 187736134 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0042] tRNA-dihydrouridine synthase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 47 |
Fosmid unclonability p-value | 0.173532 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCACAGAC CCATGCTCCT GGCCCTGGCC CCCATGAAAG ATGTGACGGA TCTGGCTTTC CTCAACACAT TGAAGGACTT GAATTCCCTG CCGGATTATT TCATCACGGA GTATTTCCGG ACGGTGGCCC ATCATAAAAA GATGTCGCCA TACATTCTGC GCTCCATTGA TGAAAATCCT ACAGGCCGCC CCATTTACGG ACAGCTCGTG GGCCATGAAC CGGAATACCT GGCAAGGGAT GCGCAGGTCC TGATGGAACA CGCCTGTGCA GGCGTGGATC TGAACATGGG CTGCCCCGCT CCCATCGTAT GCCGGAGAAA TGCGGGCGGA GGCATGCTGC GGTCCCTGAA GGCCATGGAC GCGGCCCTGG GAGCGCTTCG GGACGTATTG CCCCCCGGAG CCTTCACCGT CAAATGCCGC CTGGGATACG AAACGCCGGA CGAGTTTGAA CGGATTCTTC CGGTAATTGC CTCCCATTCC CCGGACAGGG TGTGCATCCA CGCCCGCACC GTCCGTGAGG GCTACCGCTC CCCAGTACAC CCGGAATGGG TGAAATGGGC CGCAGGAATG CTGAAATGCC CAGTAGTCGC CAACGGAAAT ATTGTGGATG CAGCCACAGC GGAGGCATGG GTGCGGCTGG CCCGGCCAGC TGGGCTGATG ATTGGGCGGG CAGCCCTGCG CAATCCCTGG ATATTTTCAC AGCTTCATTC CCGCTTTCAG GGCCATCCTG CAGCAGACCT TACCTTCCGG AACGTGCTGC ACTACATTCG CCGCCTTTAT GAACGCACGC GGGAAATGCA GGAACATTAT GTGGAGGAAA AACACATCCA CCGCATGAAA AAATATCTGG TTTATACCGC GCGGGGACTT CCCGACACTT TTGACCATTA CATGAAAAGG GCGAAAACCG CCCGCGATTT CATGCGCATT TGCGAGGATA TTCTGGATAA CGACGCACCC TTTGCCCCCA CTCCGCCGGA AGACACGCAT CTCTTTGCCC ATTTCCATAC CCTTCTTGCG CAAGAGGAAG CTTGTCTCCC TCCCGGAATT CAGGTATGA
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Protein sequence | MHRPMLLALA PMKDVTDLAF LNTLKDLNSL PDYFITEYFR TVAHHKKMSP YILRSIDENP TGRPIYGQLV GHEPEYLARD AQVLMEHACA GVDLNMGCPA PIVCRRNAGG GMLRSLKAMD AALGALRDVL PPGAFTVKCR LGYETPDEFE RILPVIASHS PDRVCIHART VREGYRSPVH PEWVKWAAGM LKCPVVANGN IVDAATAEAW VRLARPAGLM IGRAALRNPW IFSQLHSRFQ GHPAADLTFR NVLHYIRRLY ERTREMQEHY VEEKHIHRMK KYLVYTARGL PDTFDHYMKR AKTARDFMRI CEDILDNDAP FAPTPPEDTH LFAHFHTLLA QEEACLPPGI QV
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