| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amuc_1630 |
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| Symbol | |
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| ID | 6273817 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Akkermansia muciniphila ATCC BAA-835 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010655 |
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| Strand | - |
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| Start bp | 1963498 |
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| End bp | 1965198 |
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| Gene Length | 1701 bp |
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| Protein Length | 566 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 642613690 |
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| Product | sugar-phosphate isomerase, RpiB/LacA/LacB family |
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| Protein accession | YP_001878231 |
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| Protein GI | 187736119 |
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| COG category | [E] Amino acid transport and metabolism
[G] Carbohydrate transport and metabolism |
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| COG ID | [COG0112] Glycine/serine hydroxymethyltransferase
[COG0698] Ribose 5-phosphate isomerase RpiB |
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| TIGRFAM ID | [TIGR00689] sugar-phosphate isomerases, RpiB/LacA/LacB family
[TIGR01120] ribose 5-phosphate isomerase B |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 63 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCACCA CCATGAATAC GACATACAAA ATTGCCATCG GCGCGGATCA CGCCGGAGTC
GATCTCAAGG AAACCGTAGC AGAACTCCTC AAGGCATGGG GTCATGAAGT GACCGACATG
GGAACCATGA CCAAAAATTC CTGTGATTAT TCCGACTACG CCAATGCAGT CGCAAGCAGC
ATTGCTGACG GCACCAACGA CCGCGGCATC CTTATCTGCC GGTCCGGCAT CGGCATGAGC
ATTGCCGCCA ACCGCTGGGT GGGCGTCCGC GCCGCCCTCT GCCGCACGGC CCCTGCTGCG
GCCCTTTCCC GCCAGCACAA TGATTCCAAC CTGCTCTGCC TGGCTTCCGC CTATGTGGAC
AATGAAAGTG TGGAAGACGT CCTGGACGCC TGGCTGCATG CTGACTTTGA AGGCGGACGC
CATGAACGCC GCGTCGTTAA ATCCTCCGGT AGCCCCCTGC AATGGACGGA CCCGGAACTG
GCGGGCCTCA TCCAGGAGGA AGGACGCCGG GAAAGCAACA ACATTGAGCT GATTGCCTCC
GAAAATTTCA CCTCTCCCTC CGTCCGGGAA GCCCAGGGCT CCCTGCTGAC CAACAAATAC
GCGGAAGGCT ATCCCGGCAA GCGCTGGTAT GGCGGTTGCG AGGTGGTGGA CAAAGTGGAA
CAGCTCGCCA TTGACCGCGT GCTGAAAATT TTCGGCGGGG ATCATGCCAA CGTGCAGCCC
CACTCCGGTT CCCAGGCCAA CATGGCCGTT TACTTCTCTG TTCTGAAGCC GGGCGACACC
ATTCTCACGA TGGATCTCTC CCACGGCGGC CACCTCACCC ACGGACACCG GGCCAACTTC
TCCGGCAAAC TGTACAATGT GGTTCACTAC GGCGTATCCC AGGAAACGGA AGCTATTGAC
TATGATGCTT TGGAAAAACT GGCTCTGGAG GTAAAGCCGC AAATGATCAC GGCGGGAGCA
AGCGCCTACT CACGCACAAT CGACTTTGAA CGCATGGGCC AGATTGCCAG GGCCTGCGGT
GCCTACCTGT TCGTGGACAT GGCCCACATC GCGGGCCTGG TGGCCGGGGG GCAGCACCCG
AATCCGGTTC CCCATGCGGA CTTCGTCTCC TCCACCACGC ATAAATCCCT GCGCGGCCCC
CGCGGCGGCT TCGTCATCTG CAAGGAGGAA TACGCCAAAA AACTGGATGC AGCCGTCTTC
CCCGGAATGC AGGGCGGCCC CCTCATGCAC ATCATTGCCG CCAAGGCGGC CTGTTTCGGA
GAAGCTCTGA AGCCCGAATT CAAGGACTAT GCGGCCCAGG TTGTCAAAAA CGCCAAGGCC
ATGGCGGCCA AAATGGCGGA ACTCGGCTTC CGCGTCGTCT CCAACGGTAC GGACAACCAC
GTATTCATGG TAGACCTCCG CAACAAAGGC ATTAACGGTG CAGATGCGCA GGAAGCCCTG
GACCGCGTAG GCATCACCGT AAACAAGAAC GCCATCCCGT TTGACACGGG TTCTCCCATG
AAACCTTCCG GCATCCGCAT CGGTACGCCT GCCGTAACCA CTCGCGGCAT GAAGGAAAAA
GACGTGGAAC AGGTGGCTGA ATTCATTGCG CGTGCGCTGG CCTTGTACGT AGGTGACCAG
GTATGCCCGA ATCCGGAAGG CTTCTCCCAG CTTAAGGAAG AAGTTTCCGC GTTTAACCGC
AACTTCCGCC TGCCTCATTA A
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| Protein sequence | MSTTMNTTYK IAIGADHAGV DLKETVAELL KAWGHEVTDM GTMTKNSCDY SDYANAVASS
IADGTNDRGI LICRSGIGMS IAANRWVGVR AALCRTAPAA ALSRQHNDSN LLCLASAYVD
NESVEDVLDA WLHADFEGGR HERRVVKSSG SPLQWTDPEL AGLIQEEGRR ESNNIELIAS
ENFTSPSVRE AQGSLLTNKY AEGYPGKRWY GGCEVVDKVE QLAIDRVLKI FGGDHANVQP
HSGSQANMAV YFSVLKPGDT ILTMDLSHGG HLTHGHRANF SGKLYNVVHY GVSQETEAID
YDALEKLALE VKPQMITAGA SAYSRTIDFE RMGQIARACG AYLFVDMAHI AGLVAGGQHP
NPVPHADFVS STTHKSLRGP RGGFVICKEE YAKKLDAAVF PGMQGGPLMH IIAAKAACFG
EALKPEFKDY AAQVVKNAKA MAAKMAELGF RVVSNGTDNH VFMVDLRNKG INGADAQEAL
DRVGITVNKN AIPFDTGSPM KPSGIRIGTP AVTTRGMKEK DVEQVAEFIA RALALYVGDQ
VCPNPEGFSQ LKEEVSAFNR NFRLPH
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