| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amuc_1625 |
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| Symbol | |
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| ID | 6274583 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Akkermansia muciniphila ATCC BAA-835 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010655 |
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| Strand | + |
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| Start bp | 1957360 |
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| End bp | 1959159 |
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| Gene Length | 1800 bp |
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| Protein Length | 599 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 642613685 |
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| Product | DNA primase |
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| Protein accession | YP_001878226 |
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| Protein GI | 187736114 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0358] DNA primase (bacterial type) |
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| TIGRFAM ID | [TIGR01391] DNA primase, catalytic core |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 55 |
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| Fosmid unclonability p-value | 0.947875 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGAAGGA TTGATGAAGA CAGTATCCGG CGCGTTCTGG AGGCCACTGA CATTGTAGAT
GTGGTGGGAT CCTATCTTCC CCTGAAAAGG GCCGGTTCCC GGTGGAAGGC ATGCTGCCCG
TTCCACAATG AAAAGACGCC TTCCTTTATT GTGGACCAGA GTCGGCAGAA TTTTAAATGC
TTTGGCTGCG GGGAAGGAGG GTCTGCCATC ACTTTTGTGA TGAAGATGGA GAACCTGGGA
TTTGCGGATA CCGTGCGAAG GCTGGCGGAA AAAGCCGGAA TCTCCATTGT GGAGGAGGTC
TATGACGCAG CGGAGGAAAG GCGGCGCAAG GCACGCACGG CTTTGCTGGT GGCCCACAAG
AAGGCGGCTG GGTTTTTCCA CAGGCTCCTG CTTTGTTCCC CGAAGGCGGC GGAGGCCAGG
GCTTACCTGA ATTCCCGCGG ATACGGGGCA GACATGGCGA AACGCTGGCA GGTAGGGTGG
GCACCTGACT CCTCGCGGGA GTTTCTGGCC TGGGCCCGCA GGGAGGGGAT CCCGGATCAG
GTGCTGATAG ATTCCGGTCT CGCCAACCGC GGAGAACGGG GAGATTTGTA CGCCCGCTTC
CGGGACAGGC TGATGTTCCC CATCAACAAT GTGTACGGAG AATGTGTGGC GTTTTCCGGC
CGCATTCTGC GGCCTCAGGA AAACGTAGGC AAGTACGTTA ATTCCCCGGA GACGGCCATT
TTCAAAAAGG GGGACGTGGT GTTTGCCCTG GACAAGGCGC GCGGCCCTAT GGGAAAAAGC
GGCAAAGCCC TGTTGTGCGA GGGGCAGATA GACGTCATTG CCTGCCACGA GGCGGGTATT
TCTTTTGCCG TAGCCCCTTT GGGGACGGCG TTTACTCCGG AGCATGCCCG GATTCTTTCA
CGCTATGCTT CACGGATAGT GTTGTGTTTT GACGCGGACA AGGCGGGCAT GGCTGCGGCG
GACCGGGCTT TCCGTGAACT GGCCCCTTTT GGCAAGGATA TTTACCTGGT GAACCTTCCT
GCCGGGGACG ATCCGGATTC TTTCATGAAG AGGGAGGGGA AAGAGGCTTT TTCTGGGATG
GTGGAGCGGG CCCGTTCCTT CTTTGAGGTT CGCATTGAAC GGGCCAGGGA GAGCGGTTTG
TTGGATGACG CCGCTTCCAG CGCCGCTTTT GCCCGTGAGA TGACGGCCCT GCTGGCCTGC
ATGAGCGATT CGGTGGCCCG GGACCTGGCT ACGGCTGACG TAGCCACGCG CATGCGCATG
GCTGCGGATA ATTTGCGCGG CGCCGTCAGA ATGGCCGGAC GCCGGAAGGG GCAGGAACAG
GCCCAGTCCG CAGAGCGTAA GACGGCTGAG GAGGTTCCGC AGCATCCTCC TGTGAAAATG
GATCGCGCCG TGGCCGTGCT CTGTGAACTG GCCCTTCAGA ATTCCCGTGC CCAGGGGCTT
ATCGTGGACC GCATTGAAGA ATTGCTGGAG CCGATGCGGC TGCTGCAGGG CGGAGGCATC
TTAAAAAAAA TTCTGGCCAG GCTGCCTTCT CCGGACAGCC CCGCGGCCGT TCAGGCTTTT
CTGGTGTCTC TGCCTCAGCC GGAACGGGAT GCCCTGGGCA TGCTGAATCT GGAGCCCATA
CCTATTCCCG ATGTGGACAG GAGCGTACAG GAAGCCTGCT CCGGCATTGC GAAGGCCGCT
TTGGAGAGGC ACATCGCCTC CCTGATGGCG GAACTGGCGG ATCCCTCCAC GGATGCTGCC
AGAAGGCTGG AATTGTCCAA ACTTAGTGTT GACTTGAAGC GTTTGCTGGG TACAATGTAG
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| Protein sequence | MGRIDEDSIR RVLEATDIVD VVGSYLPLKR AGSRWKACCP FHNEKTPSFI VDQSRQNFKC
FGCGEGGSAI TFVMKMENLG FADTVRRLAE KAGISIVEEV YDAAEERRRK ARTALLVAHK
KAAGFFHRLL LCSPKAAEAR AYLNSRGYGA DMAKRWQVGW APDSSREFLA WARREGIPDQ
VLIDSGLANR GERGDLYARF RDRLMFPINN VYGECVAFSG RILRPQENVG KYVNSPETAI
FKKGDVVFAL DKARGPMGKS GKALLCEGQI DVIACHEAGI SFAVAPLGTA FTPEHARILS
RYASRIVLCF DADKAGMAAA DRAFRELAPF GKDIYLVNLP AGDDPDSFMK REGKEAFSGM
VERARSFFEV RIERARESGL LDDAASSAAF AREMTALLAC MSDSVARDLA TADVATRMRM
AADNLRGAVR MAGRRKGQEQ AQSAERKTAE EVPQHPPVKM DRAVAVLCEL ALQNSRAQGL
IVDRIEELLE PMRLLQGGGI LKKILARLPS PDSPAAVQAF LVSLPQPERD ALGMLNLEPI
PIPDVDRSVQ EACSGIAKAA LERHIASLMA ELADPSTDAA RRLELSKLSV DLKRLLGTM
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