| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amuc_1620 |
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| Symbol | |
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| ID | 6274715 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Akkermansia muciniphila ATCC BAA-835 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010655 |
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| Strand | + |
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| Start bp | 1948136 |
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| End bp | 1951300 |
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| Gene Length | 3165 bp |
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| Protein Length | 1054 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 642613680 |
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| Product | outer membrane autotransporter barrel domain protein |
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| Protein accession | YP_001878221 |
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| Protein GI | 187736109 |
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| COG category | [S] Function unknown |
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| COG ID | [COG4625] Uncharacterized protein with a C-terminal OMP (outer membrane protein) domain |
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| TIGRFAM ID | [TIGR01414] outer membrane autotransporter barrel domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 56 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAATTAT TTGCTTTTGC CATGTTGTCC TTGGTTCCTT TAGTTACTGT CTGTTCCGTT
TTTTCCAAGG AAGTGGATAT TTATTCAGGA ACATATGGAA ACGATGATGT GGAAGTATTC
CAGCCGGAGG AAGTGACGTA TCATCTGGCC GGAAGGGATG GCGTCTTTTA TGAAGGTGCG
TTTACGTTTG ATAATTATAA TCCGGACAAG GGCGGCGCCG GAAACAGGCA GGGTGTTTTC
TCCGGCTATA GTACACATTT TTCCAGCACG GAAGGAACGT CTCTCGGCTT TCACTGTACC
GGGCTTAATC CCGGAAAGAA CAGTTCCGCT TCCAAATCTT TTATTTTTGT CATGGGGCCA
TGGGAAAGCG GGGAGGAGTT TGTCGCTCCT CAGGTTACTT TTCAGAATTT GGGCGATTTG
AGCTTCATTG CGGATAATAT GGACATGATC GGCATTACCG ATGGCGCCAC GGCCGGAACC
GGTGGCGGGA GGTACGGGAA AGCTGATATT GTTTCTTTCA ACAATGTAGG AAATATCGAA
TTCCGGGGGC TGAATCATGG GGGTATAGGC TTCAGCCGTT TGAATTCCTT GGCTTTTACC
AATACCGGGG ATATTTCTTT TACGGATATG AAGATGGGAT ATTCTTCCAA TGGCGGTGCC
ATTTTTATTA ACCAGGGGGG GGATTCTTCC CTTTACTCCA ATCCTGGAGA TGGGAATATT
TCTTTTGACC ATACGGGAAA TATTATCTTC AGGAATCTTG TTAAAACTTC TTATTACATG
AGTTCTGCGG GGATTTTTAC CAATGAAGGG AGTATTTCAT TTAATGATAC GGAAAATATC
CTGTTTGAAA ATAACACGTC CACCGGAGGA CCTGCGGCGA TAGGCATTGG ATCCATATTC
TTACCGGATA ACCAGCCGTC TTTGTCGTTT AGCAACATCC GGGGAGATAT TATTTTTAGA
AATAATAAGG CTTCCGGAGG GAGCATGCCG GGGATGGCGG GCGCTATCAC TATTTATGGA
TCTTTTAAGC TGGTGCAAAC GGGTGATGTC CTGTTTGAAA ATAATGTGAC TGATAAAAAT
ACGGCCGGAG CCATTTATTG CGGCAATAAT GAAGGGAAAA GGTTTGGAGG GCAATGGCTT
TTGTCTGCGG ATGGCGGGAA TATCGTTTTC CGAGGCAACT TGGTTAAAGG AAGTTCGGGG
GTCTTTGCCC GCGCCCTGGG GATTTTTGCT TATGCTCCCG AAAACGATTA TACGGGCATA
TCTCAGCCCA ATGGGAATTT AACCATGGAT TTCCGCGCCC AGGCCGGACG AGAAATTGTA
TTTTATGATG GTATTGATAT TGAAAGTATT ACTGTAGCCA TGCCTACCCT GCATATTAAC
AGAATTCCGG CCGATTGGGC AGATTATGGA GGTATTCCTG TGGAGTTTGG AGGAACCGTG
CGTTTTTCCG GTGCATTGAC GGAGTCGTTT CTAGTTCGCA ATGACGGGGA AAGTGATGGT
GATTACGCGG AACGGGTGGA GACCTCCCGC AGGGTGAAAC TTGAATCAAA TATTATTGTG
GAAGGGGGAC GGCTGGTTCT TGAATACGGC ATGAACCTGG CGAATGAGAG TGGGGATGTA
TGGCAGGGAA GTTCAAGAGT GGAGCAGGAC AAACCGGTGT TTAACCTGGC CGGCGGAGTG
CTGGAAATGA CGTCCGGTTC ATCCATCAGC GCCCAGCAGG TGATTGTTTC CGGCCATGGC
AGCGGCGCTA TCCTGCGGGT GGGAGCCGCT CCCATCGGTT CCGACAGTTG GGAGGGGAAG
ACCTATGAAC TGCCTTCCCT TTCCGCTGTC ACCATTGACA TGTCCCACGG GTTTGACTGG
GATCTCATGC CTTTCTCGGA ACGGGGGGAC AGCGGTATCA ACATCACCGC CTCCGGGGAA
TTTTTACTGG GGGGAACCAT TGGAATTGCG GATACGCTGG ATGATTACGC CTCCGCCGCC
TGGGGAAGGG ACAGGGAGTT TGTCATTTTT AATATGGATT CTTCCAGCAA ACGGCCGCAA
GGAGAGCTGA AAGGGGTTAT TTCCAATACG ACCCAGTCAT CCACGGTTGA TTCTCCCTAT
ACCTACGGCG GTACCTGGGA ATATGAATGG CGCGACATGG ATGGAGATGG AGAAGATGAC
CAGCTGTTGG CAATTTGGAA ACATGAAGCC GGATGCCGCC CGGATCAGGT CCGTCCGGAG
CAGGCTGGAG AGCTTGCTCT CAATTCCCTT TGGAGTTCCG CTTCAAACGC GGCTTCTCTT
GGGAATACTG CGTTGGCGCA GTTAACCCCG GTGCGGTTGT ATCAGCGGTA TGCACGCAAT
GTATGGGGAA TGGGGCTGGG GGATTTCGCC CGCCAGCGTT CCCGGGGCGG CGTAGATGGT
TATGACTATG ACGGGGGCGG ATATTCCGTT GGCATGGATT CCGATTTTGG AGGAAAGAGC
GGGATATGGG GGATAGCGTT CGGACAAATG CACGGTTTCA GCAGGAGCCG GGATTTTAAT
GGGAGGATTA CCCAGGATTC CCTGATGGGG AGCATTTATT GGGGGCGGAT ATTCCGCTCC
GGCGAGCGTT CCCTGTGGAC GGTGAAAGCC GATCTTACTT GGGGAATGAC TGATAACTGC
ATGAAAAGCC GGTTCAGCAA CGGTATGGAC GCTCATGGGG AATGGAACAA CAGAACGTGG
CTGGTCCAGG CGGAAGTTTC CAGAAGCATT CAGTATGCAG GAGGATGGAC TGTGTCTCCG
TTTTTGAGGA TGGAGTTTAC ACATGGCACG GAGGCTTCTT TTCTTGAAGA CGGCAGCTAT
GCCAGAAAAT TTGAAGGAGC GGTTTTGCGC CGGTTGTCCA TCCCGGCAGG TGTGAGTGTT
GAGAGAAGTG GTGACTGGAA AGGCAGGCAC TGGATGCAGG TGCTCCGCCT TTCCTATGTG
GGAGATGCTA TTCAGGATGT GCCGGAGGCT TCCGTTTACA GCATATACAG CGACATTTTC
TGGAGGGCCC GTGGTGTCCA ACCAGCCCGC CATGCCGTAC GCGTGGAGTA TGATGCCGCC
TTGCAGTGGA ATGACCGCTG GACGGTTTAT GCCGGTTATG GCATGGAAGC CCGGGGAAGC
TCCGTGTACC ACCGCATAAA TGCGGGCGTA TCCAGGGCGT TTTAG
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| Protein sequence | MKLFAFAMLS LVPLVTVCSV FSKEVDIYSG TYGNDDVEVF QPEEVTYHLA GRDGVFYEGA
FTFDNYNPDK GGAGNRQGVF SGYSTHFSST EGTSLGFHCT GLNPGKNSSA SKSFIFVMGP
WESGEEFVAP QVTFQNLGDL SFIADNMDMI GITDGATAGT GGGRYGKADI VSFNNVGNIE
FRGLNHGGIG FSRLNSLAFT NTGDISFTDM KMGYSSNGGA IFINQGGDSS LYSNPGDGNI
SFDHTGNIIF RNLVKTSYYM SSAGIFTNEG SISFNDTENI LFENNTSTGG PAAIGIGSIF
LPDNQPSLSF SNIRGDIIFR NNKASGGSMP GMAGAITIYG SFKLVQTGDV LFENNVTDKN
TAGAIYCGNN EGKRFGGQWL LSADGGNIVF RGNLVKGSSG VFARALGIFA YAPENDYTGI
SQPNGNLTMD FRAQAGREIV FYDGIDIESI TVAMPTLHIN RIPADWADYG GIPVEFGGTV
RFSGALTESF LVRNDGESDG DYAERVETSR RVKLESNIIV EGGRLVLEYG MNLANESGDV
WQGSSRVEQD KPVFNLAGGV LEMTSGSSIS AQQVIVSGHG SGAILRVGAA PIGSDSWEGK
TYELPSLSAV TIDMSHGFDW DLMPFSERGD SGINITASGE FLLGGTIGIA DTLDDYASAA
WGRDREFVIF NMDSSSKRPQ GELKGVISNT TQSSTVDSPY TYGGTWEYEW RDMDGDGEDD
QLLAIWKHEA GCRPDQVRPE QAGELALNSL WSSASNAASL GNTALAQLTP VRLYQRYARN
VWGMGLGDFA RQRSRGGVDG YDYDGGGYSV GMDSDFGGKS GIWGIAFGQM HGFSRSRDFN
GRITQDSLMG SIYWGRIFRS GERSLWTVKA DLTWGMTDNC MKSRFSNGMD AHGEWNNRTW
LVQAEVSRSI QYAGGWTVSP FLRMEFTHGT EASFLEDGSY ARKFEGAVLR RLSIPAGVSV
ERSGDWKGRH WMQVLRLSYV GDAIQDVPEA SVYSIYSDIF WRARGVQPAR HAVRVEYDAA
LQWNDRWTVY AGYGMEARGS SVYHRINAGV SRAF
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