Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amuc_1562 |
Symbol | |
ID | 6273679 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Akkermansia muciniphila ATCC BAA-835 |
Kingdom | Bacteria |
Replicon accession | NC_010655 |
Strand | - |
Start bp | 1878236 |
End bp | 1881109 |
Gene Length | 2874 bp |
Protein Length | 957 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 642613622 |
Product | ATP-dependent nuclease subunit B-like protein |
Protein accession | YP_001878164 |
Protein GI | 187736052 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG3857] ATP-dependent nuclease, subunit B |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 60 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACCGAT TCTTTCTATC CTGGGACAAA CCGGCCTGCC GTGCTGTAGC GGAACGCCTG CTTTCCCTGG GAAATGGCTT CCACCGGCAT CTGGTGCTGG TTCCCACACG GGAATCCGGA AGGCAGCTGA GGGAATACCT TGCCTCCATT TCCCGTACAC AGGCCATCTT TGCTCCCCAA GTCATTCCGG CAGACCAGTT CCCCCGGATG GAAGAAAAGG AAGAAACGGC GTCCGCTCCG GAAGAACTGG CCGGGTGGCT CCTGGCCCTG GGGAAAACGC CTCACCGCCT TTATCCCCGC CTGTTTCCAC GCACCATGCC GGAGGATTTT TCCAGCATGC TGGAAATGGC CGGCAGCCTG CAAAACCTGA GGCACGCCAT GGCGAACCAG GGCGTCTCCT GCATCATGGC CCACCATGCC TGTGCGGGCA GAGACGAACG CTGGAAGGAC ATGGAAAGGC TGGAGGGACA ATGCACGCAA CAACTGGAAA GCTGGAAGCT TGAAGACAGG ACCGCCATGA AGGCGGAAGC CCCGCCCCGG CTGCTGAATT CCCTGAGGGA AACAGGTGGA AACATTATTC TGGCCTGCAC AGCGGAGGTG CCGCCCCCCC TGCGCCATGC CCTCCAGCAT GCGGAAAGAA ATGGCGTACC CGTCCAGATA TGGATACATG CGCCGGAAGA AGAAGCCGCC TCCTTTGATT CCTGGGGATG CCCTCTGCCG GAAGAGTGGT CCCGGCGCCC CATCCCAATC CGCGACGGTC AAATCAGAAT TGCGGCCAAC CCGGCGCGGC TGGCTGAAGA AACGTGCCGC ATCATCGCCC GCACAGCGGA AGGAGGAACG CCGGACATCG CCCTGGGCGT TTGCGATCCT GACATGAACG TCGCCCTGGA CGCAGCTCTG CGCCAATACG GCTGGGGCCT CCACAATCCG GAAGGGAAGC CTTTTGCCGG AAGCGGCGTC ATGGACCTGC TCCGCAACCT TCGGCGGGCG CTGGAAGAAA AGGGGACGGC GCGCCCCGTC TATTCCCTGG CGCGCTCCTC CCTGCTCTGC GCCTCCCTGG GAATAAAAGG CCAGCAGGGT TGCTGCGCCG CGCTGGACAA AATCCAGCAG AAATTCCTTC CGGAAACGGA AGAATACCTG CTTTCCAGGC TGAAAGAGGC TTATCCCGGC GCCTTTCCTT CCATCCAGGC CATTCTGGAA TGGCGGAACC GGATGGCGGA ACCGGGAATG CTGGGGGAAC GGCTGATGGA ATGGTTCCCG GCTTTGGCAA CCATCTATGG CCCGGAGACG GAAGCCATGG AAATGTTCCA TTCCTGCCTT TCCGGGCTCA TGCGTCTGCA ACAGCGCTCC ACCGCGTTTT CCAGCCCGGA GACGGCTCTC CTGCTCCTGA TGAAATGCCT CCAGCCGCTG CGTGTCAGAA ACAGGAGAAA AGCTCATGCG GCGCTGGATT CCCTGGGCTG GATGGAAGTT CACTTCCGCC CGGAAAGAAA CCTCATTCTC ACGGGACTAA ACGAAGGGAC CGTACCGGAA GGAGGCGTTT CCGACCAGTT TATGCCGGAG GAACTGCGGG AAACCCTGGG CATTGATTCC TTTAACCGGA AAAAAGCCCG GGACAGTTTT CTGCTGACCG CCCTGCTCCA TTCCCGCGAA CGGGAAGGCA GTCTCACCAT CCTTCTCTCC CGGACCAGCA GCAGGAACGA TCCTCTGACC CCTTCCTCCC TGCTCATGCG CTGCCCGGAG GCGGAGCTGC CGCACCGCGT AGAACGGCTT TTCCAGGAAA TCAGCGATGT GCCCGCTCCC CTGCCCTACC AGCGCGGAAA CTGGCATCTT CAACCCGCGG AAGGCTGGAA GACCGCTGCG GACATCGGCG CGATGGCGCC CGGCTACAAA AACCCGTGGA AGGAAAAAGG GCTGGCCTTC TCCCCCTCCG TCCTCAAAAG GTTCCTGGCC TGCCCCATGC GCTTCTGGAT GCGGGAGGCG CTGCACATGA ATGAGGAAGA ATTCCTGCCG GACAAAGAGG ACATGGCCGT CAACGAGCTG GGCACCATGC TGCACGACGT GCTGGAATGT TTCTGCCGGG AACACGCCGT CCTGAAAGAC GGCATGAACG CAGCCTCCTT TCAGAACGCT ATCACGGAAA TACTGGAACA AACCTTCCGG AAACAATACG GCCCCTCCCC CCTCATGCCC CTGCTGCTGC AAAAACGCTC CATGGAACAG AGGCTTTCCG TTTACGCCGT TCAGCATTTG CAGGCCCTTC AGGAAGGATG GTCCTGCATT GCCTTTGAGC ACCAGGTAGA AAACTGGATA CTGGGCGGCT TCCCCATGAA ATTCCGCATT GACCGCATTG ACCGCCATGC GGACGGGCAC ATACGGGTCA TTGACTACAA AACGGGAGCG GCCTCCTCCT GTGAAAAAAA GCATCTGGAC CCGCTCGGAC GGCCGGACGC CCTGCCCCTG CTTTCCCCAG CCCTGCATCC CTACACCAAA CGCCTGAAAA ACGGGAAACT GGCGCACGCG CGCTGGAAAG ACCTGCAGCT ACCCGTTTAT GTGCTGTGGG CCTCGGAAAC CTACGGGGGC CATCCCTCTG CGGCTTATTA CGCCCTTCCC GCCAATCCCA TGGACATCGG AATCTCCTCC TGGGACACCC TCCACGACAC CATGCCCGGG TATGAGGAAT GCGCGCTGGA CAGCGCCTGT TCCTGGACGG TGGAGCTGAT GAAACTTCTT CATGAAGGAC GCGGTCTCAT CACTGCGGAG GAACTGGGCT GGACACCGCC CTCTTATGAC GTATTCAAGG ACCTGATGAC TTCCCGGAGG GAAAGCCTGC AGGATCTGCT GGGCCTCCGC CTCACCCCCC ACCTTCCTTT TTAA
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Protein sequence | MNRFFLSWDK PACRAVAERL LSLGNGFHRH LVLVPTRESG RQLREYLASI SRTQAIFAPQ VIPADQFPRM EEKEETASAP EELAGWLLAL GKTPHRLYPR LFPRTMPEDF SSMLEMAGSL QNLRHAMANQ GVSCIMAHHA CAGRDERWKD MERLEGQCTQ QLESWKLEDR TAMKAEAPPR LLNSLRETGG NIILACTAEV PPPLRHALQH AERNGVPVQI WIHAPEEEAA SFDSWGCPLP EEWSRRPIPI RDGQIRIAAN PARLAEETCR IIARTAEGGT PDIALGVCDP DMNVALDAAL RQYGWGLHNP EGKPFAGSGV MDLLRNLRRA LEEKGTARPV YSLARSSLLC ASLGIKGQQG CCAALDKIQQ KFLPETEEYL LSRLKEAYPG AFPSIQAILE WRNRMAEPGM LGERLMEWFP ALATIYGPET EAMEMFHSCL SGLMRLQQRS TAFSSPETAL LLLMKCLQPL RVRNRRKAHA ALDSLGWMEV HFRPERNLIL TGLNEGTVPE GGVSDQFMPE ELRETLGIDS FNRKKARDSF LLTALLHSRE REGSLTILLS RTSSRNDPLT PSSLLMRCPE AELPHRVERL FQEISDVPAP LPYQRGNWHL QPAEGWKTAA DIGAMAPGYK NPWKEKGLAF SPSVLKRFLA CPMRFWMREA LHMNEEEFLP DKEDMAVNEL GTMLHDVLEC FCREHAVLKD GMNAASFQNA ITEILEQTFR KQYGPSPLMP LLLQKRSMEQ RLSVYAVQHL QALQEGWSCI AFEHQVENWI LGGFPMKFRI DRIDRHADGH IRVIDYKTGA ASSCEKKHLD PLGRPDALPL LSPALHPYTK RLKNGKLAHA RWKDLQLPVY VLWASETYGG HPSAAYYALP ANPMDIGISS WDTLHDTMPG YEECALDSAC SWTVELMKLL HEGRGLITAE ELGWTPPSYD VFKDLMTSRR ESLQDLLGLR LTPHLPF
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