| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amuc_1542 |
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| Symbol | |
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| ID | 6273668 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Akkermansia muciniphila ATCC BAA-835 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010655 |
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| Strand | - |
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| Start bp | 1853720 |
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| End bp | 1854499 |
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| Gene Length | 780 bp |
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| Protein Length | 259 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 642613601 |
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| Product | pyruvate formate-lyase activating enzyme |
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| Protein accession | YP_001878144 |
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| Protein GI | 187736032 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG1180] Pyruvate-formate lyase-activating enzyme |
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| TIGRFAM ID | [TIGR02493] pyruvate formate-lyase 1-activating enzyme |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.00863407 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 68 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCCGCAGG TTTTTCCACA AAACCATGAT CCGGACGGAG AAAGCTCCGT CACCGGTTTG
GTTCATTCCG TGGAATCCTG CGGCACCGTG GACGGCCCCG GCATCCGCTT CGTCCTTTTC
CTGTCCGGCT GCAGCCTGCG CTGCCGCTAC TGCCACAATC CGGATACCTC TTACGTGCGG
CGGGGACGGA CCAGGAGCGC AGATGATGTC CTCAAGGAAA TAGCCCGTTA CCGGGATTTT
TTGCAGGCGG CGGGCGGCGG CGTCACCCTC TCCGGCGGGG ATCCCCTCTT CCAGCCGGAT
TTTGCCGGTG CCGTGCTGAA AGGCTGCCGG AAACTGGGCC TGCACACCTG CCTGGATACC
TCCGGCCATC TGGGCGTGAA TGCGGGCGAA GAAATGCTGG CGGATACGGA CCTGGTCCTG
CTGGATATCA AGGCATGGAA TCCGAAACGG TATCGCGCCC TGACAGGCGG GGAACTGCGC
CCTACACTGG AGTTTGCGGA ACGCCTGGCC TCCCTCCGCA AGCCCGTGTG GCTGAGGTAT
GTGCTGGTAC CTGGCGTTAC GGACAATCTG GAAGAAATTG AGGAACTCTC CCGCCATGCG
GCGCTTCTGG GCAACGTGGA ACGCGTGGAC GTGCTCCCTT TCCACCAGCT GGGGAGATTC
AAATGGGATG AATTGAAGCT GGACTATACT TTGAAGGACG TCCCGGAAGC GTCCGCAGAA
CTGGCGGAAC AGGTCCGCGG CATTTTCCGG CGGGGCGGCT TTCCGGATTG CGTGCATTAA
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| Protein sequence | MPQVFPQNHD PDGESSVTGL VHSVESCGTV DGPGIRFVLF LSGCSLRCRY CHNPDTSYVR
RGRTRSADDV LKEIARYRDF LQAAGGGVTL SGGDPLFQPD FAGAVLKGCR KLGLHTCLDT
SGHLGVNAGE EMLADTDLVL LDIKAWNPKR YRALTGGELR PTLEFAERLA SLRKPVWLRY
VLVPGVTDNL EEIEELSRHA ALLGNVERVD VLPFHQLGRF KWDELKLDYT LKDVPEASAE
LAEQVRGIFR RGGFPDCVH
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