| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amuc_1509 |
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| Symbol | |
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| ID | 6275731 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Akkermansia muciniphila ATCC BAA-835 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010655 |
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| Strand | - |
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| Start bp | 1800746 |
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| End bp | 1801441 |
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| Gene Length | 696 bp |
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| Protein Length | 231 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 642613568 |
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| Product | HAD-superfamily hydrolase, subfamily IA, variant 3 |
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| Protein accession | YP_001878111 |
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| Protein GI | 187735999 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0637] Predicted phosphatase/phosphohexomutase |
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| TIGRFAM ID | [TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED |
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 0.000193428 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGACCATTC CTGATCACTT TGCCGATTCC CGGGAAGCCG TTCTGAAAGC GCGTGAACTG
CTCCGGCGGG CACACGCCGT CATTTTTGAT TTTGACGGAT TGCTGGTGGA TACGGAATAT
GCCATTTATT CCTCCTGGGA ACGGGTTTTC GCGTCCTGCG GCCACCCTCT TCCCCTGGAT
TTGTTCAACC AATGCCTGGG CAGCGGTTAC ACCCACTGGA ATCCCGGAGA ACATCTGGAG
AAATTGACGG GGCGCACTTT CGACTGGGAA ACCGTCAACA GCCGCCGCCA GGAGGAAATC
GTCCGGGATC TGGAACATGC CGGCCTCCTG CCCGGCGCCG GAGAACTCAT CCGGAACCTG
GGGGAAGCCG GAACCCCTAT GGGAGTGGCC TCCAGTTCTT CCCACCGCTG GGTGGACGGC
TGGCTGAACA GATTGGGCAT CATGCCCTAT TTTCAAACCG TCGTCTGCCG CGACGACGGC
CTCCCCGTCA AACCGGATCC GGCCCTGTTC CTGAAAGCCG CGGAAAACCT GGGTAAATCT
CCGTCTGGAT GCCTGGTGCT GGAAGACTCC CAGAACGGCA CTACAGCCGC ACACCGCGCA
GGAATGCCAG TCATCTCGGT TCCAAACAGG GTAACGGAGC AGGCGGATTT TTCCCTGGCG
ACCAGTATCA TCCGCTCTCT GACGGAACTT CTTTAG
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| Protein sequence | MTIPDHFADS REAVLKAREL LRRAHAVIFD FDGLLVDTEY AIYSSWERVF ASCGHPLPLD
LFNQCLGSGY THWNPGEHLE KLTGRTFDWE TVNSRRQEEI VRDLEHAGLL PGAGELIRNL
GEAGTPMGVA SSSSHRWVDG WLNRLGIMPY FQTVVCRDDG LPVKPDPALF LKAAENLGKS
PSGCLVLEDS QNGTTAAHRA GMPVISVPNR VTEQADFSLA TSIIRSLTEL L
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