Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amuc_1490 |
Symbol | |
ID | 6274567 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Akkermansia muciniphila ATCC BAA-835 |
Kingdom | Bacteria |
Replicon accession | NC_010655 |
Strand | - |
Start bp | 1780160 |
End bp | 1782034 |
Gene Length | 1875 bp |
Protein Length | 624 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 642613550 |
Product | TrkA-C domain protein |
Protein accession | YP_001878093 |
Protein GI | 187735981 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0471] Di- and tricarboxylate transporters |
TIGRFAM ID | [TIGR01131] ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes) |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 47 |
Fosmid unclonability p-value | 0.149438 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTTCCTC TTCTCAACAT CAACTCCGCC TCCGTCATAG GCTGGCTGGA ATCAGCGGCC GCCCAGCAAT GGATTGTAGG CATTCTGCTG GTCCTGTTAT TCATCAGCTT CATCAAGGAA TGGATGCCCG TGGAAATCAC AGCCCTGACA GGCACCGCCG TCCTCATGCT CACGGGAATT CTGAGCACGC GTGATGTGCT GTCCAGCTTT GCCAACAGCG GACCGCTGAC AGTGGTGTGC ATGTTCATTC TGAGTGCTTC CCTGGAAAGA ACGGGATTAA TAGGAGACCT TTCCAAACTG TTCAACAAGG TAGCCAAGGG GAGGGAACTG ACCGCCCTGC TGGTCATTAC ACTGGGAGCG TTCATGGTTT CCCCCTTCGT CAACAACACC CCGGTGGTCG TCATCCTGAT GCCCATCGTG CTGGCCTTCT GCAGGGATCA TAACATCGCG GCCTCCAAGC TGCTCATCCC CCTCTCCTAC GCCACCATTC TGGGAGGCAC CTGCTCCGTG GTCGGAACAT CCACCAACGT AGTTGTGCTC GGCCAGGTGC AGAAACTGGG TTATGACGGC ATCCAGATGT TCACGGTAAC GCCCATGGGC CTGATTTATG CGGCGGCGGG CCTGCTCTAC CTCTGGACAT TAGGCCGCAA ATGGCTTCCA TCCCGCCCCA CTTTGTCCAC CATGCTTCCG GGCGGCATCC AGCGCGATTT CCTGCTCCAG GTCAGAATTC CCGCGGATTC CCCCCACATC GGCACCACTC CCATCAACCT GATGCAAACC GAGTTGCTGG GCACCAAAAT CGTGGAAGTT CGCCGCAGGG GATTCTCCAT GCAGGAAGAG CTGCAGCACA TCAACCTGGA AGAAGGAGAC CGCATTCTTT TCCTGTGCAA CGCCAGAAAA GTCAACCAGG TGAGGGAAGC CAAAGGCGTG GACCTGGGCT GGGATGACAG CCGCGGGCTG GAAACGCTGG AGCAGCGCGA TGTGCAAATC GTGGAAGGCA TGATCGCCAA CAATTCCGAA TTCGCCGGGC TGTCCCTGTC CGAACTCAAG CTGCGCCAGA GATTCAACAT CTTCGTGCTC GCCATCCACA GGCAGGGCAA AAACATCACG GACATGGGGC CGAACACCAA GCTGGCGGCA GGGGACACGC TTCTTCTGGA AGGACCGCAG GAAGGAATGA ACCGCATCCT GACCAAGCAG CGCATCATCC CCCTGAGCCA GCGTCCTGCG GAAGCGCACA ACCGCAGCAA ACAGGGCTGG GCCATCCTGG CCATGGGGCT GTTCATTTTT ATCGGCCTGC TGGGCTCCTT TGAGCAATAC GGGGAATTCT TCAAATTCTT CGCGCGCTTC AATCCCTTCT ATCTCGCCTA CATCGGAGCT CTCATCGTCA TCATCTCCGG CTGCATCAAG CCGAAGGAAG CCTACCAGGC GGTGGACTGG GGCATTATTT TTCTGATTCT GGGAATGCTG TGCGTGGGAG AAGCCATGAG CAAAACCGGG CTTGCCAAAG CCATTGCTTT CGGCGTAGTG GATAATATAG GCCCGTTGGG GTGCCTGGTC GCCATCTCCG GCCTGTACCT GATCTGCTCT ATCCTGACGG AGATGATCTC CAACAATGCC GTAGCGGCCG TCATGGGGCC TCTGGCTTAT GAAATGGCCC TGCAATTCGA CGCCAACCCC ATTCCCTTCA TTCTGGCTGT CATGTTCGGC GCCAGCGCCA GCTTCTCCAC CCCCATCGGC TACCAGACCA ACACTTACGT GTACAATGCG GGCGGTTACA AATTTAAGGA CTTCGTCAAA GTGGGACTCC CCCTCAACCT GCTCCTCTGG GTCATTTTTA CCTGCGCCAT CGGCTGGTTG TATCCGCTCA AGTAG
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Protein sequence | MLPLLNINSA SVIGWLESAA AQQWIVGILL VLLFISFIKE WMPVEITALT GTAVLMLTGI LSTRDVLSSF ANSGPLTVVC MFILSASLER TGLIGDLSKL FNKVAKGREL TALLVITLGA FMVSPFVNNT PVVVILMPIV LAFCRDHNIA ASKLLIPLSY ATILGGTCSV VGTSTNVVVL GQVQKLGYDG IQMFTVTPMG LIYAAAGLLY LWTLGRKWLP SRPTLSTMLP GGIQRDFLLQ VRIPADSPHI GTTPINLMQT ELLGTKIVEV RRRGFSMQEE LQHINLEEGD RILFLCNARK VNQVREAKGV DLGWDDSRGL ETLEQRDVQI VEGMIANNSE FAGLSLSELK LRQRFNIFVL AIHRQGKNIT DMGPNTKLAA GDTLLLEGPQ EGMNRILTKQ RIIPLSQRPA EAHNRSKQGW AILAMGLFIF IGLLGSFEQY GEFFKFFARF NPFYLAYIGA LIVIISGCIK PKEAYQAVDW GIIFLILGML CVGEAMSKTG LAKAIAFGVV DNIGPLGCLV AISGLYLICS ILTEMISNNA VAAVMGPLAY EMALQFDANP IPFILAVMFG ASASFSTPIG YQTNTYVYNA GGYKFKDFVK VGLPLNLLLW VIFTCAIGWL YPLK
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