Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amuc_1464 |
Symbol | |
ID | 6275692 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Akkermansia muciniphila ATCC BAA-835 |
Kingdom | Bacteria |
Replicon accession | NC_010655 |
Strand | - |
Start bp | 1755606 |
End bp | 1756541 |
Gene Length | 936 bp |
Protein Length | 311 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 642613524 |
Product | Squalene/phytoene synthase |
Protein accession | YP_001878067 |
Protein GI | 187735955 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1562] Phytoene/squalene synthetase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 57 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTCAAG CCCAAACCAT CACCAGCAAG GCCAAGTCCA ACCTGGCCTT TGCCCTCATT GATCTTCCTG AAGAAGAACG CCGCCATATG GCGGAATTTT ACGCTTTCTG CCGCACGGTG GACGATATCG TGGACGAACC GGGCATGACT CCCCGCGAAC GCCACGACGC ATTGAACCGC TGGGTGGAGG TCATCAACGG CGGAGAAGGC CTGGAACTGA CGGAACTGGA GGAGGACATC ATAGCCCTCA TCCAGGATTT GGAGCTGGAC ACTACTCCCA TGCTGCACCT GATTGAAGGC TGCCGTTCGG ACATCTGCCA GCAGCAGCCC CGCAGCCGCG ATGAACTGCT GGACTACACC TACTGCGTAG CCTGCTGCGT GGGCCTCACC TCCGCCCGCA TCATGGGGGC GGGAGAAGCC TCCTATCCGT ACGCCATTGC CCTGGGGCAT GCCCTTCAAA TGGTGAACAT CATCCGGGAC GTGGCGGAAG ACTGCGGCAA GTCCAACCGC ATTTATTTGC CCAAGGAGGA TATGGACCGC TTTGGATACA CCCTGGAAGA CCTGCGCTGC AGGGTGTATT CCCCCCGGCT TCAGGAGCTG CTGAAATATG AAGCGGATCT GGCGGAAACT TTCTTTGCGG AAGCGGAGAG GGAATACAAC CTTCTCAGCC CGGAAGACAA AGCCGCCCTT ATTCCGGCGC AGGCCATGGC GCTCATTTAC CATACCATTC TGGACAAAAT GAAGGCGAGC GGCTTCCGTA TTTTCGACAT CCGCTACCGC GTCAACACCT TCCACAAGCT CTGGCTCCTG TTCCGCACCA AACTGGATAT TGACCCTCAA TCCTACTACG ACAAATCCAA AGCGTATTAT GACAAGCTGG TAGGCTTTCT TTCCCGCCCC GGCAGAAAGG ATGAAAAACA GGGGCCTCCC AGGTGA
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Protein sequence | MTQAQTITSK AKSNLAFALI DLPEEERRHM AEFYAFCRTV DDIVDEPGMT PRERHDALNR WVEVINGGEG LELTELEEDI IALIQDLELD TTPMLHLIEG CRSDICQQQP RSRDELLDYT YCVACCVGLT SARIMGAGEA SYPYAIALGH ALQMVNIIRD VAEDCGKSNR IYLPKEDMDR FGYTLEDLRC RVYSPRLQEL LKYEADLAET FFAEAEREYN LLSPEDKAAL IPAQAMALIY HTILDKMKAS GFRIFDIRYR VNTFHKLWLL FRTKLDIDPQ SYYDKSKAYY DKLVGFLSRP GRKDEKQGPP R
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