| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amuc_1424 |
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| Symbol | |
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| ID | 6274582 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Akkermansia muciniphila ATCC BAA-835 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010655 |
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| Strand | - |
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| Start bp | 1708759 |
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| End bp | 1711311 |
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| Gene Length | 2553 bp |
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| Protein Length | 850 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 642613481 |
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| Product | major facilitator superfamily MFS_1 |
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| Protein accession | YP_001878027 |
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| Protein GI | 187735915 |
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| COG category | [G] Carbohydrate transport and metabolism
[S] Function unknown |
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| COG ID | [COG2814] Arabinose efflux permease
[COG3055] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 49 |
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| Fosmid unclonability p-value | 0.314854 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCACATGA CACGCTCCCT TACCCGAATT TCCAAGGCTT GCGGCTCCGC TCTGGCAGCC
CTGCTTCTCA TCGCGGCTCC GGCCGCTGAC GCCTCCTTTT CCGTGGATGT CCGGACGTCC
GGAACTGTTC CCGACCTTCC GGACCCGGCA GGCCGCGCCG GCATGGTTGC CGGAACCGTC
ACGGAAGACG ACGGCAGCCA GTCCGTCATC GCCGCAGGGG GCGCCAACTT CCCCCAGGCT
GCGCCGGGCG CCTCAACTCC GGAGGAACGC GGCCCCAAAA CCTACTACCA GGATATTTTC
AAGCTTCGCA ACGGCCAGTG GAGCAAGGCG GGAACATTGC CCGTCCCGCT GGGTTACGCC
GCCTTTGCCA GCGTGGGCAA GGGGCTGGCT GTGGCCGGAG GCCACAATGC TCAGGGCATC
CTGAAAGATG CCCTGCTGAT TAAAACGGAC GGCTCCGTAG AAAAGCTTCC TCCCCTTCCC
GTCCCCGTAA CGGAAGCCTC CTGCGCCGCC CACGGGAACA AATTGTTCGT CATCGGCGGC
AGAGACCGGG AGCAGCCGGA AACCGCACTC AATACCATCT ACATGCTGGA CACCACGCCG
GACACGGATA AAATGAAATG GGTTTCCCTT CCCCCTTTTC CCGGAGAGGG GCGCATTCTC
TCCACCGCTG CCGTCTGCGA CAGCACCCTG TTCATCATAG GCGGCTGTTC CCTGTCCAGG
GATAACTCCG GAGAAACCTC CAGGACGTAT CTTTCCGACA TGATCGGCTA CGACATGACG
TCCAAGGACC CTTCCAAATG GGGCTCCTCC GGCAGGCAGC AGCTTGCCGG ACCGGGAATG
CCCGTAGCCG CCGCCGCGGG TCCCGCCCCG GTGCGGGAAA ACTCCATTCT CCTGATCGGC
GGAGACAAGC GCGGCAACTC GCCGGACCCG TCCAGGCCTG TGGCGCAGTC CCGGGATATC
CTGGTCTATG ACGTCATCGG AAACACATGG ACGCGCCAGG GGGAATGGCC CGTGGGCATC
GCCACGGTTC CCGCCGTTGT CAGGGGCTCT GAAATCATGA CCATCAGCGG GGAAACGGCC
CCGGGCGTCC GGACCCCGGC AAACGCCTCC GCCTCCGCAG GTTACCACTT TGAAATGAGC
ACGGTTGATT ACGCCGTTCT CATTCTGACC ATCATCGTCC TGGCGATCAT CATCGTCTCC
GCCGTGCGCA ACGGCGTTAA AAATGTTGCC TCCGTCACGG ACCCGAACAC CAAACCGGGC
CTGTGGGCCT GGGTAGCCGT CATTGTCCTG TGGTTTGTGG TCATGCTGAA CTATTTTGAC
CGCCAGCTCC TTTCCGCCCT GCATGAACCC ATCGTACGGG ACATTCCGCA GACGGAAGCC
CAGTTCGGCA TGGTCACCTC CGTTTTCCTG CTGATTTACG CCCTGCTCAG CCCGGTGGGC
GGCTTTCTGG CGGACCGCTA CAGCCGCCGG CTGATGATCC TCTGCTCTCT CGTCGTCTGG
TCCGTGGTCA CATGGTGGAC CGGCCATGCG GAAGATTACA CTTCCCTGCT CATTGCGCGC
GGAGCAATGG GCATCAGCGA GGCATTCTAC ATCCCCGCCG CCCTGGCCCT GATTACGGAC
TACCACCGCG GCAGCACGCG CTCCATCGCT ACGGGCCTGC ACATGAGCGG CATCTATGTA
GGCATGGCCG TCGCCGGCTT CGGTGCCACC ATGGCTTCAT GGACGGGATG GCGCATGACG
TTCGCCCTGT TCGGCCTCAT CGGCGTGGCG TACGCCGTCA TCCTCATCCT GTTCCTGAAA
GATCCGGCCA AGGCCCCGGC GGATACGGCC CAGGCAAAAA AACCGTCCGT ACCGGAGGAA
AAAACGGTGC TGCTCAATGT GGACAATGAC GAACAGGCCA TCAAGGAACC CTCTTCCAAA
CTTTCCACCG GAGCCGTCCT TTCCAGCCTG CTGAGCGGAC GCCCCATGTG GATGCTGCTG
GCCGTAGTGG CCTTTGCCGG AGCCGGAAAC TGGTTCCTTC TCACCTGGTA TCCCACCCTG
CTTCAGGACA AATACCAGCT CTCCTCCGCG GAAGCGGGCC CCGCCGCCAC CCTGTGGAGC
TCCGTGGCCA AATACGTCGC CGTGCTGGGA GGCGCCATCC TGGCGGATAT GTGGTACAGG
CGCAACGCCC GCGCCCGCGC CCTGGTGCCG GGCATCACCT TCACCATATC CGGCCCATTA
GTGGTTCTGG CGCTGCTGCC CGGCATCTTC GGCTGGGACA TCACCGTTCC GCTCGTGCTC
ATGCTGGGTC TGGTCGCCAC GCAGGGGCTG GCGCAGGGAT CACTGGACGC CACCCTCATG
CCTGTGCTAC GCTCCCATAT CGACGAGCGT TATTCCGCAA CCGGCTATGG CCTCCTCAAC
CTCACATCCG CCGGCGTGGG CGCCCTCATC TCCTTCTTTG GGGGATGGTT CAAGGATCAG
GGCGTTCCGC TGACCACCAC CCTGGCGGCG GCAGGATGCC TGATGCTGTT CTGCGGGCTG
CTGCTCCTGA TGCTGCCGCG TCCCAAACAT TAA
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| Protein sequence | MHMTRSLTRI SKACGSALAA LLLIAAPAAD ASFSVDVRTS GTVPDLPDPA GRAGMVAGTV
TEDDGSQSVI AAGGANFPQA APGASTPEER GPKTYYQDIF KLRNGQWSKA GTLPVPLGYA
AFASVGKGLA VAGGHNAQGI LKDALLIKTD GSVEKLPPLP VPVTEASCAA HGNKLFVIGG
RDREQPETAL NTIYMLDTTP DTDKMKWVSL PPFPGEGRIL STAAVCDSTL FIIGGCSLSR
DNSGETSRTY LSDMIGYDMT SKDPSKWGSS GRQQLAGPGM PVAAAAGPAP VRENSILLIG
GDKRGNSPDP SRPVAQSRDI LVYDVIGNTW TRQGEWPVGI ATVPAVVRGS EIMTISGETA
PGVRTPANAS ASAGYHFEMS TVDYAVLILT IIVLAIIIVS AVRNGVKNVA SVTDPNTKPG
LWAWVAVIVL WFVVMLNYFD RQLLSALHEP IVRDIPQTEA QFGMVTSVFL LIYALLSPVG
GFLADRYSRR LMILCSLVVW SVVTWWTGHA EDYTSLLIAR GAMGISEAFY IPAALALITD
YHRGSTRSIA TGLHMSGIYV GMAVAGFGAT MASWTGWRMT FALFGLIGVA YAVILILFLK
DPAKAPADTA QAKKPSVPEE KTVLLNVDND EQAIKEPSSK LSTGAVLSSL LSGRPMWMLL
AVVAFAGAGN WFLLTWYPTL LQDKYQLSSA EAGPAATLWS SVAKYVAVLG GAILADMWYR
RNARARALVP GITFTISGPL VVLALLPGIF GWDITVPLVL MLGLVATQGL AQGSLDATLM
PVLRSHIDER YSATGYGLLN LTSAGVGALI SFFGGWFKDQ GVPLTTTLAA AGCLMLFCGL
LLLMLPRPKH
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