Gene Amuc_1391 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmuc_1391 
Symbol 
ID6275715 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAkkermansia muciniphila ATCC BAA-835 
KingdomBacteria 
Replicon accessionNC_010655 
Strand
Start bp1661268 
End bp1662551 
Gene Length1284 bp 
Protein Length427 aa 
Translation table11 
GC content58% 
IMG OID642613448 
Producthypothetical protein 
Protein accessionYP_001877996 
Protein GI187735884 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones50 
Fosmid unclonability p-value0.298142 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTATTC AGCCCGCCGT TTTTTTCTCT CTTCTATTGG CATCCCTTTC TCTTCCCTCC 
TTCTCCCTTA CCCCGCCCAG TGAAAAATTC CGGGCGGCAG ACTGGGCGGT GCTTCATTCA
TCCCGGAGCG ACCAGCGGCA TGTTTCCTCC CGGGGCATCG TCCAGACCAT GCTGGAAAAA
CTGCGTCCGG CATGCGAATT TTCCCCGGAT ATGGCTCCGA AGGATTTCCC CGCCTGGCGG
GAAAAAGTCC GGAAAGCCAT GCAACAACTG ATGAAATTCC CCCCCCAGGC GGATATCCCC
GCCCCCGTTC TGGTAAAAAC CGTGCCAAGA GAACACTACC GGGTGGAAAA ATGGGAAGCC
TATCCCTTCC CGGGAGCCGC CGTACCGTTC CTGGTGCTCC TGCCGGACAA CGCTTCAGAC
AAAAATCCGG TTCCCGTGCT ATTCTGCATT CCCGGGTCAG ACCAGACCAA GGAAGAGCTG
GCGGGGGAAA CATCACCGGA TCTGGACCAG CCTTCCGTAC AGCAGCCGGG CAACAACGCC
ATGGCTTTCC ATTATGTCAG GCAGGGATGG GCGGCCATTG TGGTGGACAA TGCCGGAACG
GGTGAAGAAG GAGACGCGGA ACACGCCGCA GGCCGTTCTT CACACGATTA TGAAAACCTG
GCCCGCTTCC TGCTGGAAAT GGACTGGAGC TGGCTGGGCT ACACCTCCTA CGCGGACCAA
TGTATTCTGG ATTGGGTGAA AACACGACCC TGGGCGCAAA AAAACCATAT TATCCTCAGC
GGCTTCTCCC TGGGAACGGA ACCCATGATG GTTCTGGGCA GCCTGAACCC GGATATCTTT
GCCTTCGTAT ATAACGACTT TCTGTGCCGC ACGCTGGAAC GCGCCAAAAC CATGACCATG
CCCAACGGCA GGGGCGTGCG TTCCGCTCCC AACTCCATCC GCCACCTCAT TCCGGGCTTC
TGGAAACAAT TCGACTTCCC GGACATCGTG GCGGCTCTCG CTCCGCGCCC TGTCATTTGC
ACGGAAGGCG GCCTGGACAG GGACTTCCAG CTCATCTCCG CAGCCTACCG TATGGCCGGG
GCGCCGGATC ATTTCCAGTA CCATCACCAG CCCCGGTTTG CGGACCCTGC CCAACGCTGG
CACGGCAGCC AATTGCCCGC AGGTCTGGAC AGGGACGCCT TTTTCCGTTT CGCCAATGTG
GACCCGCGCA ACCATTTCTT CAAAAAAGAC CTGGTCATTC CCTGGCTTAA AACCCTCCTG
GATAAAAGCG ATAATAAAAA CTAG
 
Protein sequence
MTIQPAVFFS LLLASLSLPS FSLTPPSEKF RAADWAVLHS SRSDQRHVSS RGIVQTMLEK 
LRPACEFSPD MAPKDFPAWR EKVRKAMQQL MKFPPQADIP APVLVKTVPR EHYRVEKWEA
YPFPGAAVPF LVLLPDNASD KNPVPVLFCI PGSDQTKEEL AGETSPDLDQ PSVQQPGNNA
MAFHYVRQGW AAIVVDNAGT GEEGDAEHAA GRSSHDYENL ARFLLEMDWS WLGYTSYADQ
CILDWVKTRP WAQKNHIILS GFSLGTEPMM VLGSLNPDIF AFVYNDFLCR TLERAKTMTM
PNGRGVRSAP NSIRHLIPGF WKQFDFPDIV AALAPRPVIC TEGGLDRDFQ LISAAYRMAG
APDHFQYHHQ PRFADPAQRW HGSQLPAGLD RDAFFRFANV DPRNHFFKKD LVIPWLKTLL
DKSDNKN