| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amuc_1382 |
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| Symbol | |
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| ID | 6274437 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Akkermansia muciniphila ATCC BAA-835 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010655 |
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| Strand | - |
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| Start bp | 1647982 |
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| End bp | 1649004 |
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| Gene Length | 1023 bp |
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| Protein Length | 340 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 642613439 |
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| Product | secretion protein HlyD family protein |
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| Protein accession | YP_001877987 |
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| Protein GI | 187735875 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1566] Multidrug resistance efflux pump |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.396008 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 0.000481704 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAAAAAGC TGGTTATCCT CCTGGTTCTC CTTGCGGCGG CAGGAACGGC CGCCTGGCTC
ATCTACCGGA AAACTCCGTC CGGGCCCGAG GACAAAGCCG TTCTTTACGG CAATGTGGAC
CTGCGCCAGG TGGATCTGGC TTTCCTCATC TCCGAACGTA TTGACTCCGT GCTGGTGGAC
GAAGGGGACA CGGTTGTTCC CGGCCAGAAG CTCGCCACGC TGGAAACGGT GCGGCTCCGG
CAGGCCGCGG ACGAAGCCCG GCAGATAGCG GAAGCCGCCC GCCAAAACTA CCTGCGCGTT
AAAAACGGCC CGCGCGCGGA AGAAATAGCC CAGGCGAGGG CGAACGTGCA GGCCGCGGAA
GCTACGCTGA ACAACGCCGG AATGCGCAGC AAAAGGCTGG AGGCGCTGGC TGAAACAAAA
TCCATCTCCC GCCAGGAGGC GGACGACGCC GTCGCCTCCC GGCAAGTGGC CGCCGCCAAT
CTGGACGTAG CCAGAAAACA GCTGGAACTG CTGCTGGCCG GTTCCCGTGA GGAAGACGTA
GCCCAGGCGC TGGCCCAGTA CAACCAGGCC AAAGCCAGCC TGACCATCAG GGAGCAGAAC
CTGAAAGACG CCGTGCTCTA TGCCCCCGGC AACGGCGTGG TGCGCAACCG CATTCTGGAA
AAGGGGGACA TGGCCTCCCC GCAGAAACCC GTTTACAACA TCTCCCTGAA CCATACCAAA
TGGGTGCGGG CCTACCTCAC GGAATCCCAG CTCGGCAAAG TAAAGCCCGG CTTTTCCGCC
ACCGTGCGCA ATGACAGCTT CCCGGACACC GGCTTCAAAG GGACGGTGGG GTTTATCTCC
TCCGTAGCGG AATTCACCCC TAAAAACGTG GAAACGCCGG ATCTCAGAAC GGCACTGGTC
TATGAAGTGC GCATCATTGT GGACGATCCG GACAACCGGC TGCGCCTGGG AGCCCCCGCC
ACCGTCACCA TCCCCCTGGA CCAGAACGCC GGAACACAGC CCCCGGAACA GCCCAGGCCA
TGA
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| Protein sequence | MKKLVILLVL LAAAGTAAWL IYRKTPSGPE DKAVLYGNVD LRQVDLAFLI SERIDSVLVD
EGDTVVPGQK LATLETVRLR QAADEARQIA EAARQNYLRV KNGPRAEEIA QARANVQAAE
ATLNNAGMRS KRLEALAETK SISRQEADDA VASRQVAAAN LDVARKQLEL LLAGSREEDV
AQALAQYNQA KASLTIREQN LKDAVLYAPG NGVVRNRILE KGDMASPQKP VYNISLNHTK
WVRAYLTESQ LGKVKPGFSA TVRNDSFPDT GFKGTVGFIS SVAEFTPKNV ETPDLRTALV
YEVRIIVDDP DNRLRLGAPA TVTIPLDQNA GTQPPEQPRP
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