Gene Amuc_1315 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmuc_1315 
Symbol 
ID6273721 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAkkermansia muciniphila ATCC BAA-835 
KingdomBacteria 
Replicon accessionNC_010655 
Strand
Start bp1594072 
End bp1594986 
Gene Length915 bp 
Protein Length304 aa 
Translation table11 
GC content52% 
IMG OID642613371 
Producthypothetical protein 
Protein accessionYP_001877920 
Protein GI187735808 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones47 
Fosmid unclonability p-value0.129667 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTATCA ATACAGGAGG ACGGACGGAC ACCGTCCAGT ATTACACCCG CTGGCTGCTG 
AAGAGATTTG AAGAAGGCTA TGTCCTTTCC CGCAATCCCC TGTTCCAACA TAAGGTGACC
CGCTATGAAC TGACGCCGGA CCAAGTGGAC TGTGTTGTCT TCTGCTCTAA AAATTATGCC
CCCATTCTTC CGCATATCAA CAGCATCACC GAGCGCTTCC ATACCTACTT CCACTATACG
ATTACGGCCT ACGGAAAGGA AATTGAACCG GGTGTTCCCG GCATTGATGA AAGCATGGCC
ACGCTGGCAA AACTTTCGGA AGTTGTCGGA GCAAACCGCA TCGCATGGCG GTATGACCCG
GTATTGCTGA CAAGTGAATA TACCATCAGA AGGCATCTGG AGACCTTTGA ACGCATGGCG
TCCTTCTTAT CCGGCCACAT CGACCGCTGC ATTTTCAGCT TTGTGGAAAT GTACAGGAAG
CTGCAAACCA ACATGCCGGA GCTAATCCCC CTCACGGAAA AAGACAAGGA GGAGCTGGCG
GCCGGGCTGG GAGCGATCGC GGCCGAATAT AAAATCCCCA TTCAAACCTG CGGAACCAAT
GGCGATTACA CGCGTTACGG CATTTCATCC TCCGGCTGCA TGACCCTGAA CATTCTGGGA
CAGGCCAACG GCGTTCAATT CCGCAACCTG AAACATCAAG GAATGCGGCA GGGCTGCCAT
TGCATTGAGA GCCGGGACAT AGGAGCGTAT GACACCTGCC TTAACGGCTG CAAATACTGC
TATGCAAATA CGAACCGGCA AAAGGCCCGT GAAAATTACA AACTCCATGA CCCGGACTCT
CCGTTGCTGC TGGGGCATCT GCTCCCTTCC GATACCGTGC AGCAGGGAAT GCAAAGGAGC
TTTTTAAAAC CATGA
 
Protein sequence
MIINTGGRTD TVQYYTRWLL KRFEEGYVLS RNPLFQHKVT RYELTPDQVD CVVFCSKNYA 
PILPHINSIT ERFHTYFHYT ITAYGKEIEP GVPGIDESMA TLAKLSEVVG ANRIAWRYDP
VLLTSEYTIR RHLETFERMA SFLSGHIDRC IFSFVEMYRK LQTNMPELIP LTEKDKEELA
AGLGAIAAEY KIPIQTCGTN GDYTRYGISS SGCMTLNILG QANGVQFRNL KHQGMRQGCH
CIESRDIGAY DTCLNGCKYC YANTNRQKAR ENYKLHDPDS PLLLGHLLPS DTVQQGMQRS
FLKP