| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amuc_1251 |
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| Symbol | |
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| ID | 6275403 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Akkermansia muciniphila ATCC BAA-835 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010655 |
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| Strand | - |
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| Start bp | 1501602 |
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| End bp | 1504805 |
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| Gene Length | 3204 bp |
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| Protein Length | 1067 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 642613308 |
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| Product | carbamoyl-phosphate synthase, large subunit |
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| Protein accession | YP_001877857 |
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| Protein GI | 187735745 |
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| COG category | [E] Amino acid transport and metabolism
[F] Nucleotide transport and metabolism |
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| COG ID | [COG0458] Carbamoylphosphate synthase large subunit (split gene in MJ) |
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| TIGRFAM ID | [TIGR01369] carbamoyl-phosphate synthase, large subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 58 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCTAAAG ACACCTCCAT CAAAAAGATT CTCGTGATCG GGTCCGGCCC GATCGTCATC
GGCCAGGGCT GCGAATTCGA CTACTCCGGC ACCCAGGCCT GCAAAGCCCT CCGGGAAGAG
GGTTATGAAG TAGTGCTGGT CAATTCCAAT CCCGCCACCA TCATGACGGA TCCGGAGACA
GCTCCACGCA CTTATATTGA ACCGATTACT CCGGAGTTCG TGGAGAAAAT CATCATCCGG
GAAAAACCGG ATGCCCTCCT CCCGACCCTG GGCGGGCAGA CAGCCCTGAA CTGCGCCATG
GAACTGCACC GCAGCGGCGT GCTGGAAAGG GAAAAGGTGC GTATGATCGG CGCCAACGCA
AACGCCATTG ACCGCGGGGA GGACCGCAAC CTGTTCAAGG AAGCCATGCT CCGCATTGGC
CTGGACGTGC CGCGTTCCGG CATTGCGCAT ACCATGGAGG AAGCGCGCCG GGTGGCCGGG
GATATTGGCA CCTTTCCCCT GATTGTCCGC CCCGCCTTTA CGCTGGGCGG CATGGGAGGC
GGCGTGGCGT ACAACAAAAC GGAATTTGAA GAGATATGCG CCCGGGGGCT GGATCTTTCC
CCCGTTTCCG AAATCCTGAT TGAAGAGTCC CTGATCGGCT GGAAAGAGTT TGAAATGGAG
GTAATGAGGG ACCGCGCGGA CAATTGCGTC GTCATTTGCT CCATTGAGAA CATCGACCCC
ATGGGCGTGC ATACCGGGGA TTCCATCACC GTAGCCCCCA TCCAGACACT CACGGACCGA
GAATACCAGG CCATGAGGGA CGCTTCTTTT GCCGTCATCC GGGAGATCGG GGTGGAAACG
GGCGGTTCCA ACATCCAGTT CGCCATTAAT CCGGCCAACG GCCGCATGAT TGTCATTGAA
ATGAACCCCC GCGTTTCCCG CTCTTCCGCG CTGGCTTCCA AGGCCACAGG GTTCCCCATT
GCCAAACTGG CCGCCAAACT GGCCATAGGC TATACGCTGG ACGAATTGCG GAATGACATC
ACGCGGGAAA CGCCCGCCTG CTTTGAGCCC ACCATCGACT ATGTGGTTAC CAAGGTTCCC
CGCTTCACGT TTGAAAAGTT CAAGCAGGCG GACGAACACC TGACCACGTC CATGAAATCC
GTAGGGGAGG CCATGGCCAT CGGTCGTACT TTCAAGGAAT CCCTGCAAAA GGCCTTGCGT
TCCCTGGAAA CGGGACGCTG GGGCTGGGGA TTTGACGCGA AGGCCCCGCA GGCTCCTTCC
GCAGAAGAAA TCACGCGGAA ACTGGCTGTT CCCACGGCAG AACGCATTTT CTGGATTCAA
ACGGCGTTCA GCAACGGATT TTCCCTGGAT GAAGTGCAGC AGCTTACCCA GATTGATCCC
TGGTTCCTGG CACAAATGCA GGACCTGGCC AAGGCGGGAG ACAGCCTGGA CAAGCTGGAT
CTGCGGGAAG CCAAGAAGCT GGGCTTTTCC GACAGGCAGA TCGCCCTGGC CCGGGGAACC
ACGGAAGAAA ACATCCGGAA GGAACGCCTG GAACAGGGCA TTGTGCCCGG ATACCGGCTG
GTGGATACCT GCGCCGCGGA ATTCGAAGCC TACACCCCCT ACTTTTATTC CACCTATGGA
GATGAAAATG AAGCCCGCGA AACAGGCAGA AAAAAAATCC TCATCCTGGG CGGCGGCCCA
AACCGCATTG GCCAGGGGAT TGAGTTCGAC TACTGCTGCG TGCACGCCTC CATGGCTCTG
CGGGAAATGG GCTACGAAAC CATCATCGTG AACTCCAACC CGGAAACCGT CTCCACGGAC
TATGATTCCT CCGACAAGCT TTTCTTCGAA CCCCTGACGC TGGAAGACGT GCTCCATATC
TGTGAACAGG AGAAGCCGGA CGGCGTCATC GTCCAGTTCG GAGGACAGAC GCCGCTGAAC
CTGGCCAATG CGCTGGAAGC CCACGGCGTG CCTATTATCG GCACCAGCCC CAGGGCCATT
GACCTGGCGG AAGACCGCGA ACATTTTTCC GCCCTGTTGA AGGAACTGGG GCTGAAACAG
GCGGAGGCAG GAACAGCCAC CAATGTGGAG GACGCCGCCG CCATTGCCGC GCGCATCGGT
TACCCGGTGC TGCTGCGCCC CTCCTTCGTG CTGGGCGGAC GCGGCATGAT CATCGTATAT
GAGGAAAAAG AACTGCGCCG GTACATGAAT GAAGCCGTGG AAGCTTCCGA GGAACGCCCC
GTTCTGATTG ATCGCTTCCT GGAAAATGCC GTAGAGATTG ACGTGGATGT CATCGCGGAC
AGGGAGCGCG CCGTCATCGG AGCCATCATG CAGCATGTGG AACCGGCAGG CATCCATTCA
GGGGATTCCG CCAGCATGAT TCCCGCCATG GGAATTTCCA TGAAAATGCA CAAGGAAATC
ACGCGGGCTT CCAAGGAACT GGCAAGCAAA CTGAACGTCT GCGGGCTGAT GAACATCCAG
TTTGCCGTAA AAGACGAACA GCTTTACGTC ATTGAGGTGA ATCCCCGCGC CTCCCGCACC
GTTCCGTTCG TCTCCAAATC CATCGGCAAG CCCCTCGCCA AGCTGGCCGC ACAGGTCATG
GCCGGCAAAA CGCTGGCGGA ACTGGGCTTT ACCCGGGAAA TCACTCCGGA ATACTATTGC
GTGAAGGAAG CCGTTTTCCC ATGGGGCCGC TTCCCGGGCA TCGACGTGGT GCTGGGGCCG
GAAATGAAAT CCACCGGAGA GGTGATGGGC ATTGATCCGG ACCCGGATAT CGCTTTCGCA
AAATCCCAGG TCAGTGCATT CAATCCCCTG CCGACGGAAG GCAAAGTCTT CATCTCCGTG
AATGACCGGG ACAAGGAACG GGTGCTTCAC ATGGCCCGGC AGCTGGCGGA CATGGGATTC
ACGCTGTGCG CCACGCGCGG CACGATGATT CACCTGCTCC AGCACGACAT TGAATGCGAA
CGCGCCTACA AAGTCAACGA GGCGCGCCGC CCCAACATCG TGGACCATAT TAAAAACGGG
GATATTGATT TCATCATCAA CACCCCCGGC TCCCACGACG CGCGGGCGGA CGACATCATC
ATCCGTTCCT CCGCCATTGC CGCCAAAACC TCCTATTGCA CCAACCTGGC TTCCGCGCAG
GCCTGCGTGA ATGCCATTGA GGCGCTGAAG AACAAAAATC TTCAGGTGTG CACTATTCAG
GAGTACCACG CCCAAAACCT TTAA
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| Protein sequence | MPKDTSIKKI LVIGSGPIVI GQGCEFDYSG TQACKALREE GYEVVLVNSN PATIMTDPET
APRTYIEPIT PEFVEKIIIR EKPDALLPTL GGQTALNCAM ELHRSGVLER EKVRMIGANA
NAIDRGEDRN LFKEAMLRIG LDVPRSGIAH TMEEARRVAG DIGTFPLIVR PAFTLGGMGG
GVAYNKTEFE EICARGLDLS PVSEILIEES LIGWKEFEME VMRDRADNCV VICSIENIDP
MGVHTGDSIT VAPIQTLTDR EYQAMRDASF AVIREIGVET GGSNIQFAIN PANGRMIVIE
MNPRVSRSSA LASKATGFPI AKLAAKLAIG YTLDELRNDI TRETPACFEP TIDYVVTKVP
RFTFEKFKQA DEHLTTSMKS VGEAMAIGRT FKESLQKALR SLETGRWGWG FDAKAPQAPS
AEEITRKLAV PTAERIFWIQ TAFSNGFSLD EVQQLTQIDP WFLAQMQDLA KAGDSLDKLD
LREAKKLGFS DRQIALARGT TEENIRKERL EQGIVPGYRL VDTCAAEFEA YTPYFYSTYG
DENEARETGR KKILILGGGP NRIGQGIEFD YCCVHASMAL REMGYETIIV NSNPETVSTD
YDSSDKLFFE PLTLEDVLHI CEQEKPDGVI VQFGGQTPLN LANALEAHGV PIIGTSPRAI
DLAEDREHFS ALLKELGLKQ AEAGTATNVE DAAAIAARIG YPVLLRPSFV LGGRGMIIVY
EEKELRRYMN EAVEASEERP VLIDRFLENA VEIDVDVIAD RERAVIGAIM QHVEPAGIHS
GDSASMIPAM GISMKMHKEI TRASKELASK LNVCGLMNIQ FAVKDEQLYV IEVNPRASRT
VPFVSKSIGK PLAKLAAQVM AGKTLAELGF TREITPEYYC VKEAVFPWGR FPGIDVVLGP
EMKSTGEVMG IDPDPDIAFA KSQVSAFNPL PTEGKVFISV NDRDKERVLH MARQLADMGF
TLCATRGTMI HLLQHDIECE RAYKVNEARR PNIVDHIKNG DIDFIINTPG SHDARADDII
IRSSAIAAKT SYCTNLASAQ ACVNAIEALK NKNLQVCTIQ EYHAQNL
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