Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amuc_1239 |
Symbol | |
ID | 6275828 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Akkermansia muciniphila ATCC BAA-835 |
Kingdom | Bacteria |
Replicon accession | NC_010655 |
Strand | + |
Start bp | 1487261 |
End bp | 1487707 |
Gene Length | 447 bp |
Protein Length | 148 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 642613296 |
Product | Biopolymer transport protein ExbD/TolR |
Protein accession | YP_001877845 |
Protein GI | 187735733 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0848] Biopolymer transport protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.371549 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 52 |
Fosmid unclonability p-value | 0.35298 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAATTTC ATTATAAAAT GCCCAGTCCC ATCGGGTTTC AATTGGCCCC CATGCTGGAC ATCGTATTTC TGCTGCTGGT GTTTTTCATC GTAACCCAGA CATTTGAGGA TGATGAACCG GATCTTTCCA TCAATCTTCC TTCAGCAGAG ACTCCCAAGC CCGGTGAAAA CGTGTCCAAT GAAATTATCG TGAATATCCG TAAAGATGGT ACCGTGGTAA TCAACCGCCA GCAGTACACA ATGCCGCAGC TGGAAGACAA ACTTTTTTCC GTCGCCCGGT TGGACAAAAC CATGCTCGTC CGTATCCGCG TGGATGAGAA GGCGGAATCC GGCGTGGTGG TGCATGTGAT GGACGCATGT CTGAAGGCCG GGCTGAATAA CGTTTCTTTT TCCACGCGTC CTCCGGTTCC ATCTTCAATC AATGTTTCCA ATTCCCAGGC TTCATGA
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Protein sequence | MKFHYKMPSP IGFQLAPMLD IVFLLLVFFI VTQTFEDDEP DLSINLPSAE TPKPGENVSN EIIVNIRKDG TVVINRQQYT MPQLEDKLFS VARLDKTMLV RIRVDEKAES GVVVHVMDAC LKAGLNNVSF STRPPVPSSI NVSNSQAS
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