| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amuc_1200 |
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| Symbol | |
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| ID | 6273843 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Akkermansia muciniphila ATCC BAA-835 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010655 |
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| Strand | - |
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| Start bp | 1436788 |
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| End bp | 1437831 |
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| Gene Length | 1044 bp |
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| Protein Length | 347 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 642613251 |
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| Product | cobalamin (vitamin B12) biosynthesis CbiM protein |
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| Protein accession | YP_001877806 |
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| Protein GI | 187735694 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0310] ABC-type Co2+ transport system, permease component |
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| TIGRFAM ID | [TIGR00123] cobalamin biosynthesis protein CbiM |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.028093 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 70 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCATATGG CGGACGGCTT CATCTCACCG GCGGTAGGCT GCACCATGTG GGCGGCTTCC
GCTGCAATTA CAACGCTCTG CACACGTAAG GTCAGGCAGG AAAAAGAAAT GCGGCTCGTC
CCGCTCATGG GCGTGCTGGG AGCCTTCATC TTTGCCTGCC AGATGCTGAA TTTCACCATT
CCGGGCACCG GCTCCAGCGG CCATCTGGGC GGCGGCCTCA TCCTGGCGGT CCTTCTGGGG
CCGTATGCGG GGTTCCTGGT CATGGCGGCC ATCCTGACGG TGCAGGCCCT TTTCTTTGCG
GATGGGGGGC TGCTGGCCCT GGGCTGCAAT ATTTTCAATA TGGGGTTTTT CTCCTGCCTG
GTAGCTTACC CTTTCATTTA CAGGCCCCTG GCCGGAACAA AAACCGGCAC GGGCCGCATC
ACGCTGGCCA GCGTCATCGC CGCCGTCATC GGGCTCCAGA TGGGGGCTTT CTCCGTCGTT
CTGGAAACAA CGGCCTCCGG CATCTCAGCC CTGCCCTTCG CCCAATTTGT TGAATTGATG
CTGCCCATTC ATCTGGCCAT CGGCGCCGTA GAAGGCCTTG CTACGGCAGC CGTCGTCATC
TTCATCAGCA AGGCACAGCC GTCCCTGCTG CGCCCGGCCG ACTTGGAAAC CGGAACCGTC
AAAAAAGCAT CCTGGACCGT TTTGGGCATC TTTGCGGTAG CGGCCCTGCT CTGCGGAGCC
GCCCTCTCCT GGTTCGCCTC CGCCTATCCT GACGGACTGG AATGGTCTGT AGCCGGAGTC
ACCGGGTCGG AAGAAACCAG GCTGGCGGAA CCGTCCCCCC TCCACCGGAA CCTGGAAACC
GTACAGGAGG CCACCGCCAT TATGCCGGAC TACGCCTTTC CCGCTGATGA CGGGGCAAAC
ACCGCAGAAA CGGAAGCTTC CTCCTCCATT GTCAACCCTG AAACGAGCAT GGCCGGCGTG
CTGGGAAGCG CCATTATTGC AGCCCTTATT TTTGCGGCCG GTTTCCTGTT CGGCAGAAAA
CCGCACAGCC ACTGCCCCCG CTGA
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| Protein sequence | MHMADGFISP AVGCTMWAAS AAITTLCTRK VRQEKEMRLV PLMGVLGAFI FACQMLNFTI
PGTGSSGHLG GGLILAVLLG PYAGFLVMAA ILTVQALFFA DGGLLALGCN IFNMGFFSCL
VAYPFIYRPL AGTKTGTGRI TLASVIAAVI GLQMGAFSVV LETTASGISA LPFAQFVELM
LPIHLAIGAV EGLATAAVVI FISKAQPSLL RPADLETGTV KKASWTVLGI FAVAALLCGA
ALSWFASAYP DGLEWSVAGV TGSEETRLAE PSPLHRNLET VQEATAIMPD YAFPADDGAN
TAETEASSSI VNPETSMAGV LGSAIIAALI FAAGFLFGRK PHSHCPR
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