| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amuc_1180 |
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| Symbol | |
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| ID | 6273770 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Akkermansia muciniphila ATCC BAA-835 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010655 |
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| Strand | + |
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| Start bp | 1414971 |
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| End bp | 1415666 |
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| Gene Length | 696 bp |
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| Protein Length | 231 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 642613231 |
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| Product | GntR domain protein |
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| Protein accession | YP_001877786 |
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| Protein GI | 187735674 |
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| COG category | [K] Transcription |
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| COG ID | [COG2186] Transcriptional regulators |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 72 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGCAGT CCAAGACAAT GGAGCTGAAG AAACCGGTGC GGGTGTCCCT GGCCCGCCAG
GTGCTTACCG CCATGGAATC CATGATACGG TCCGGCAAAT GGAAGGTTGG AGACCGCATT
CCCGCGGAAG CGGAACTGGC CCGTGCCTTT TCCGTCAGCC ACAACACCAT CCGCGAAGCC
CTTCAATCCC TGATTCACAT GGGGATGCTG GAAGCGCGCC CCGGAGACGG CACGTACGTG
ATGGCGTCAG ACCGCTTTGC CGTCGCGGTG AGCAACCGCC TCAAGGAATC CGAGCTGCCT
CAGATTCTGG AGGCGCGGCT GGCTTTGGAA AAGGAAATTG CGCGGCTGGC CGCCGTTAAA
AGGACGGATG AAGATTTGAA GGAGCTGGAA AATGCCCTGA AGGACTGCCA CGGCAGGGTA
AGGCAGGGCA TTGAGGATGA CATGCTGTTT CATGCCGCCG TGGCCCGCGC CACGCATAAT
CCGGTGCTCT CGGAATTGTA TAACGTGGTC ATCCGCCATG TGCAGGAGAA TCTGGAAAAG
CTGCTTCAGG AGAAGCAATA CGACTCCGGC GCCATGAAGC TGCATGACGA CCTTCTCGCA
GCCATCAGGA AGCAGGAGGC GGATGAAGCG GAGAACATTA TTGTAAAGAT TGTGGAATTT
GACACCGTCA GCATAGGCGG GGCATTCATT TCTTGA
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| Protein sequence | MKQSKTMELK KPVRVSLARQ VLTAMESMIR SGKWKVGDRI PAEAELARAF SVSHNTIREA
LQSLIHMGML EARPGDGTYV MASDRFAVAV SNRLKESELP QILEARLALE KEIARLAAVK
RTDEDLKELE NALKDCHGRV RQGIEDDMLF HAAVARATHN PVLSELYNVV IRHVQENLEK
LLQEKQYDSG AMKLHDDLLA AIRKQEADEA ENIIVKIVEF DTVSIGGAFI S
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