Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amuc_1051 |
Symbol | |
ID | 6274059 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Akkermansia muciniphila ATCC BAA-835 |
Kingdom | Bacteria |
Replicon accession | NC_010655 |
Strand | - |
Start bp | 1254017 |
End bp | 1254673 |
Gene Length | 657 bp |
Protein Length | 218 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 642613102 |
Product | Endopeptidase Clp |
Protein accession | YP_001877658 |
Protein GI | 187735546 |
COG category | [O] Posttranslational modification, protein turnover, chaperones [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0740] Protease subunit of ATP-dependent Clp proteases |
TIGRFAM ID | [TIGR00493] ATP-dependent Clp protease, proteolytic subunit ClpP |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.0321666 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 61 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTTCAAG ACCAATCTTC CAAATCAACC CCCGCAAACT CCTATTATGT GCCCATGGTG GTGGAGCAGG ACGGCCGCGG CGAACGAGCC TTTGACATTT ACTCCCGTCT CCTGAAAGAC CGCGTTATCT TCATCGGCTC CGCTATTGAC GACGATGTGG CGAATTCCGT CATTGCCCAG CTTCTGTTCC TTCAGATGGC TGACCCGAAA AAAGACATCC ACGTCTACAT CAACTCCCCC GGAGGATCCG TCACGGCGGG TCTCGCAATT TACGATACGA TGCAATTCGT CTCTTGTGAC GTAAATACAT ATTGCCTGGG CATAGCGGCC TCCATGGGTT CCGTCCTTCT GGCTGCGGGA ACTCCCGGCA AACGCTTCTG CCTGCCGAAC TCCCACGTAA TGATTCACCA GGTTTCCGGA GGTGCCCAGG GAACCGCTTC AGATGTGGAA CGCACCATCG GCTTCATGTT CAACCTCAAA AAACGCCTCA ACGGCATTCT GGCCAAACAT ACCGGTAAAA CGGAAAAGCA AATTGAAAAG GATGCTGACC GCGACAACTA CATGACTGCC GAGGAAGCCG TGGCCTACGG CCTGGTGGAT AAAGTTCTGG CGCATCACTC TGATGACCAG GGCGACAAGA AAAAAACCAA GGCCTGA
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Protein sequence | MFQDQSSKST PANSYYVPMV VEQDGRGERA FDIYSRLLKD RVIFIGSAID DDVANSVIAQ LLFLQMADPK KDIHVYINSP GGSVTAGLAI YDTMQFVSCD VNTYCLGIAA SMGSVLLAAG TPGKRFCLPN SHVMIHQVSG GAQGTASDVE RTIGFMFNLK KRLNGILAKH TGKTEKQIEK DADRDNYMTA EEAVAYGLVD KVLAHHSDDQ GDKKKTKA
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