Gene Amuc_1017 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmuc_1017 
Symbol 
ID6274100 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAkkermansia muciniphila ATCC BAA-835 
KingdomBacteria 
Replicon accessionNC_010655 
Strand
Start bp1209881 
End bp1210585 
Gene Length705 bp 
Protein Length234 aa 
Translation table11 
GC content60% 
IMG OID642613066 
Producthypothetical protein 
Protein accessionYP_001877624 
Protein GI187735512 
COG category[R] General function prediction only 
COG ID[COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)  
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones67 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTTTGGC TTCTGCACGG CAATCTGGGT TCTCCGGCGG ATTGGAAACC CGTCATGGAT 
TTTCTTCGTG CCGGAGGAGT GGAGGCTCGC GCCCTGAACC TCTGGAGGTA TCTGGAATGC
TGCCCCAAAA GCCTGAAGGA TATGGGGCGC GTGCTTTGTT CCGAAATAGC CTCCCAGGAT
CGTCATCCCC TCATCTGCGG CTATTCCCTG GGGGGCAGGT TGGCCATGCA GGCCGTTTTG
GCCCATCCCC CTCTCTGGAA AGGAGCCATA TTCGTCAGCG CCAATCCCGG CCTGGAACAT
GAAGAGGAAC GGGCGGCGCG GCGGGCGAAG GATGCGGAAT GGGCCGTCCA ATGCCTTTCC
GCATCTTGGG AAAATTTTTT GAAGGAATGG GATGCCCAGG GCGTATTTGA AGGCAGTCCG
CCGCCTCCGG ACCGTTCTTC CCTGAAACCG TGGCGCAAAT CCATCTCCCG CGCCTTTATT
GACTGGTCCG CGGGCGCACA GGAAAACCTG GCCCCGCTTT TGAAGCAATC CCCTGTTCCC
CAGCTGTGGA TTGCCGGACA GCGCGATGCC AGATTCAGCG CCCTGGCGCG GCGCATGGCA
GGAGGGCAAG CCGTCATCAT CCCTCATGCC GGCCACCGGC TTCCCCTGGA AACGCCGGAA
AGGCTGGCGG AATGCCTGCA ACCATTTATT CTGCAAAACC TATGA
 
Protein sequence
MLWLLHGNLG SPADWKPVMD FLRAGGVEAR ALNLWRYLEC CPKSLKDMGR VLCSEIASQD 
RHPLICGYSL GGRLAMQAVL AHPPLWKGAI FVSANPGLEH EEERAARRAK DAEWAVQCLS
ASWENFLKEW DAQGVFEGSP PPPDRSSLKP WRKSISRAFI DWSAGAQENL APLLKQSPVP
QLWIAGQRDA RFSALARRMA GGQAVIIPHA GHRLPLETPE RLAECLQPFI LQNL