| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amuc_0999 |
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| Symbol | |
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| ID | 6274127 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Akkermansia muciniphila ATCC BAA-835 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010655 |
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| Strand | - |
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| Start bp | 1191193 |
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| End bp | 1191786 |
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| Gene Length | 594 bp |
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| Protein Length | 197 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 642613049 |
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| Product | sigma 54 modulation protein/ribosomal protein S30EA |
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| Protein accession | YP_001877608 |
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| Protein GI | 187735496 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1544] Ribosome-associated protein Y (PSrp-1) |
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| TIGRFAM ID | [TIGR00741] ribosomal subunit interface protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.0736054 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 55 |
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| Fosmid unclonability p-value | 0.80204 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCAAAAGG TAAACGTAAA CACACCCATT ACGATCACGG GGCGCCACGT GGAAGTCACA
GACGCGATTC GGGAATTCGT AACGAAAAAA ATTGAGGGGA TCCGCCTGGA TTTCCCGCGC
ATTATGGAGG TTAAAGTACT GCTTGATGTG CAACGCGACC GCAAGATTTC CCAGGTAATC
CTGTTCTGCT CGGATCATAT CACCATTGAC GCGTCCACGG AAGGGACGGA CATGTACGCC
TGCATTGATG AGACGATCAC CAAAATCATG CGCCGCATGC GCAAGCACAA AACGCGCCTG
ATGAAGAATT TCCGTCCCCA TCACCAGGAA ACCATCCGCA AGCTGGATGA AACGGTATAT
GACGATTCCG TGCTGGATTA CCCAGGAGAT TCCCCGGAAG ACCCGGAACC CCTGCTCATT
CACAGAGAAA GCTACAATCT CAAAAAGCTT TACAAGGAAG AAGCCATCAT GGAACTGGAA
CTTTCCGATA AGCCATTCGT ACTCTACAGG AATGCGCGGC GAGACGTGCT CCAGATCGTG
TATCGGAGGC CGGACGGGGA CTACTCCATC ATTGAGCTTG GGAGCAGCCT GTAA
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| Protein sequence | MQKVNVNTPI TITGRHVEVT DAIREFVTKK IEGIRLDFPR IMEVKVLLDV QRDRKISQVI
LFCSDHITID ASTEGTDMYA CIDETITKIM RRMRKHKTRL MKNFRPHHQE TIRKLDETVY
DDSVLDYPGD SPEDPEPLLI HRESYNLKKL YKEEAIMELE LSDKPFVLYR NARRDVLQIV
YRRPDGDYSI IELGSSL
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