Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amuc_0971 |
Symbol | |
ID | 6274181 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Akkermansia muciniphila ATCC BAA-835 |
Kingdom | Bacteria |
Replicon accession | NC_010655 |
Strand | - |
Start bp | 1160384 |
End bp | 1162390 |
Gene Length | 2007 bp |
Protein Length | 668 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 642613025 |
Product | UvrD/REP helicase |
Protein accession | YP_001877584 |
Protein GI | 187735472 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0210] Superfamily I DNA and RNA helicases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.0211694 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 49 |
Fosmid unclonability p-value | 0.301959 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCAAGT CCTTTTCCAT GGAGAGCCTG AACGCGGCCC AGAGGAAGGC CGTGCAGACC CTGCAGGGGC CCGTGCTGAT CCTGGCCGGG GCCGGAACGG GTAAAACGCG CACCGTCACC TGCCGCATCG CCCATATGGT GGACCGTGGC ATCAGCCCCA AAAGCATCCT GGCCGTGACG TTCACCAACA AGGCCGCTCT GGAAATGCGG GAACGCGTAG GCCAGATGGT GGAACGCAAG GCGGCGCGCC AAATAATGGT GAGCACTTTC CATTCCCTTT GCGTTCGTAT CCTGAGAGAG GATATAGGAC GCCTGGGGTA CAAAACCAAT TTCACCATTT ACAGCGGTTC CGAGCAAAGC GGCCTGATCC GGCGACTGAT TGTGCGCCAC GGCGGCATTA CGGAGAAAAT CACGCCCAAA GATGTGCTTT CTTCCATGAG CCGGATGAAA AACAGCGGTC TGGGCCTTGA CTCCATTGAA GACAACCTGA CAGCCAACAT CGCCGCCTCC TACCAGCGGG AACTTCAGGC GCAGAATTCC GTGGACTTTG ACGACCTGCT GATTCTGGCG GACAAATTGC TGAAGGAGCA CCGGGACGTC AGGGAGGCGT GGCAACAGCG CTTCCGCTAT ATCACCGTAG ATGAATTCCA GGATACCAAC AGCCTCCAAA TGAGCCTGCT GGGCCATCTG GTAGGTCCGG AACACAATGT CTGCGTAGTG GGAGACGACG ACCAGTCCAT CTACGGCTGG CGAGGCGCCC AGATCAGCAA TATCCTGGAA TTCGAACGTT TTTTCCCAAA TCCCTCCGTC ATCAAACTGG AAGAAAATTA CCGCTGCACC GCCCCCATTC TGGACACGGC CAATGCCCTG ATCCGCCACA ATCTGGGCCG GAGGGACAAG ACGCTGCGCG CCCACAAAGG CGGAGGAGAA GCCGTCCGGC TCATTTCCAT GCCCGGAGAC GCGGAAGAGG CGGAATTCAT CATTACGGAC ATTGAAAACG TCCGCAGGCA GGAAGGCCGG CCCTGGGAGG ATTTCGCCAT TCTGTTCCGG GCCAATACCC AGAGCCGCAT CATTGAACAA ACGCTCCGGG AACACAAAAT TCCCTACCGC ATGGTGGGCG CGCAAAGTTT TTTCGACCGC AAGGAGGTGA AAGACCTCAT TTCCTATCTG GCGACTATCG AAAACCCGCA GGCTGACGAA TACCTGCTGC GCATCCTCAA CACGCCGCCG CGCGGCATCA GCGAGCTGAC CAGCCATCTG GTCATCGACT GGAGCCGGGA GCACGGCAAC AGCGTCTGGG CAGCCCTCCA GGACGAAGAA TTCCTGGCGG CCCTTTCCAC CCGCGCCCGC AACAGCGTGC AGGCATTCAA TGAACTGATT GCAAAATACA TTGACCTTTT CCAGGATAAG GAAACCGACT TCGGAGACAT CCTGGAGCAG CTTATTGAGG AAACCGGATT CAGCGAATAC GTCACGCGCC TGTGCAAAAC GGAAGCTGAA ATCCAGAAAC GGCTGGTGTC CATCGGGGAC GTGAAAGCCT CCCTCCGCAA CTTCTGGCAA CCCGGAAAAA CCCTCCGGGA CTACCTGGCC CAAGTCACCC TGGACAAGGA GGATAATGAT GACGACGTGG AAAACAAGCC AGGCGTATGC CTGATTACCA TGCACGCCGC CAAGGGACTG GAATTTCCGG TAGTGTACCT CGTGGGGCTG GAGGAAGGCA TTCTTCCCCA CAAGCGTTCC CTGGAAGACG GCAATTGCGA CGAAGAACGC CGCCTGCTTT ACGTAGGCAT CACGCGCGCC CAGGAGAAAC TCATGCTTAC TTATTGCGCC ACGCGCCTGC GCTACGGGGA CCGCATGCCT TGCCAGCGCT CCTCCTTCCT TAGTGAAATT CCTCCCCACC TAATGGAATA TTACAAATGG GAGGATCTCA TGAACGCGGA AGCGACGGAA GAGGAATCCG GAAACTTTTT CGATTCCCTG CGCAGCATGC TTCTGGAAGA GGAATAA
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Protein sequence | MAKSFSMESL NAAQRKAVQT LQGPVLILAG AGTGKTRTVT CRIAHMVDRG ISPKSILAVT FTNKAALEMR ERVGQMVERK AARQIMVSTF HSLCVRILRE DIGRLGYKTN FTIYSGSEQS GLIRRLIVRH GGITEKITPK DVLSSMSRMK NSGLGLDSIE DNLTANIAAS YQRELQAQNS VDFDDLLILA DKLLKEHRDV REAWQQRFRY ITVDEFQDTN SLQMSLLGHL VGPEHNVCVV GDDDQSIYGW RGAQISNILE FERFFPNPSV IKLEENYRCT APILDTANAL IRHNLGRRDK TLRAHKGGGE AVRLISMPGD AEEAEFIITD IENVRRQEGR PWEDFAILFR ANTQSRIIEQ TLREHKIPYR MVGAQSFFDR KEVKDLISYL ATIENPQADE YLLRILNTPP RGISELTSHL VIDWSREHGN SVWAALQDEE FLAALSTRAR NSVQAFNELI AKYIDLFQDK ETDFGDILEQ LIEETGFSEY VTRLCKTEAE IQKRLVSIGD VKASLRNFWQ PGKTLRDYLA QVTLDKEDND DDVENKPGVC LITMHAAKGL EFPVVYLVGL EEGILPHKRS LEDGNCDEER RLLYVGITRA QEKLMLTYCA TRLRYGDRMP CQRSSFLSEI PPHLMEYYKW EDLMNAEATE EESGNFFDSL RSMLLEEE
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