| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amuc_0945 |
|---|
| Symbol | |
|---|
| ID | 6274220 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Akkermansia muciniphila ATCC BAA-835 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010655 |
|---|
| Strand | + |
|---|
| Start bp | 1125947 |
|---|
| End bp | 1127023 |
|---|
| Gene Length | 1077 bp |
|---|
| Protein Length | 358 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 642612999 |
|---|
| Product | glycosyl transferase family 2 |
|---|
| Protein accession | YP_001877558 |
|---|
| Protein GI | 187735446 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0463] Glycosyltransferases involved in cell wall biogenesis |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.761656 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 78 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGTAT CCGTTTCCAT CATTGTTCCC TGTTATAATG TTGCCGCTTA TTTGGACCAG
TGTATGGAAA GCCTGGCCGG CCAGAGCATG GAAGATATCG AAATCATTTG CGTCAATGAC
GGTTCTTCCG ACCGTACGGC GGAGATATTG CGCGAATGGC GGGACAGGGA CGGCCGCGTC
CGGGTAATTG ACCGGAAAAA CAGCGGTGTT TCCGCGGCGA GGAACAGCGG CATGGAAGCG
GCTGCGGGAA AGTATATCGG CTTTGTGGAC CCGGACGACG TGGTGGAGCG GAATATGTTC
CGGCGCCTGT TTGATGCGGC CGTGGAAAAA GATGCGGACG TAGCGGTGTG CGGATACCAT
GAGTTCTGCG ACCGCGGAGG CATGGATATG CCTGAAAGCG GCTGGTCGCC GTCAGCCGGG
TTTTTCCCGG AAGAAAAAGC GGAGCGGTTC CGGCGGGGGA CGCCCTGGAG CCGGTGCGCG
GGAACGGTGT GGAATAAGCT GATCCGCAGG GAGCTGCTGG AAGAAAACGG TGTGCGTTTC
GTTCCCGGAT TGCGCCAGGG GGAGGATTTG TATTTCTGTC TGATGCTGTT GACTGTTGCT
CCGCGGCTCC TGATCCTTCC CGACCGTTTG TACCATTACC GGAGGGAACG CCCCGGTTCC
GCCTCCTGCG GGCGGGATCC CCGCCTGGGG GATTTCCGCA TGGATTTGAT GGGCATGGAA
TCTCTGGCGC GTTTCTGGGG GGAGCGGGGG CTCCTTGATT CTCCCGCCGC CTTCGGTCTG
GTGGACTACT GCATGGAGTT GATGCGCAGG CATTTCATCA TGAAAGAGGG AGCTTTTTTC
AAAGCGTCTC CGGAAGACCG GGAAGTTCTG CTTTCCGGCT GGAAAAAGTG GCTGGAGCTG
GTGGGCGCGG AGAACGTCCT TCCCCGTCTG GACCGGTGGG ACCGGGCTTT TTGCCGCCTT
CTGCTGGATT GCCCCCTGCG GAGCAATTTT TTCTCTGCCC TGCATTCCCG CCTGATGTCG
TCCCGCAAGG GGCGCCGGGG GGCTTACTAT ACCCTGAAAA GGCACCTGAT GAAGTGA
|
|---|
| Protein sequence | MSVSVSIIVP CYNVAAYLDQ CMESLAGQSM EDIEIICVND GSSDRTAEIL REWRDRDGRV
RVIDRKNSGV SAARNSGMEA AAGKYIGFVD PDDVVERNMF RRLFDAAVEK DADVAVCGYH
EFCDRGGMDM PESGWSPSAG FFPEEKAERF RRGTPWSRCA GTVWNKLIRR ELLEENGVRF
VPGLRQGEDL YFCLMLLTVA PRLLILPDRL YHYRRERPGS ASCGRDPRLG DFRMDLMGME
SLARFWGERG LLDSPAAFGL VDYCMELMRR HFIMKEGAFF KASPEDREVL LSGWKKWLEL
VGAENVLPRL DRWDRAFCRL LLDCPLRSNF FSALHSRLMS SRKGRRGAYY TLKRHLMK
|
|---|
| |