| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amuc_0928 |
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| Symbol | rplF |
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| ID | 6274237 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Akkermansia muciniphila ATCC BAA-835 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010655 |
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| Strand | + |
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| Start bp | 1108218 |
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| End bp | 1108757 |
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| Gene Length | 540 bp |
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| Protein Length | 179 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 642612982 |
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| Product | 50S ribosomal protein L6 |
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| Protein accession | YP_001877541 |
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| Protein GI | 187735429 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0097] Ribosomal protein L6P/L9E |
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| TIGRFAM ID | [TIGR03654] ribosomal protein L6, bacterial type |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.00000870536 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 70 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCCGAG TTGGTAAAAA ATCCATCACA TTGCCGGACA AGGTAACGGT AAAGGTTAAC
GGCTCTTCCG TTCAGGTGGA AGGCCCCAAA GGCAAGCTTT CCTGGACGCT TCCGGAAGGC
ATTACCGCTA CCGTTGAAGG CAATCAGCTC TCTGTTGACC GCGCCGGCGA AAGCCGCCAG
CTTCGCGCCC TGCACGGTAC GAACCGTTCC CTGTTGAACA ACATGGTCAT CGGTGTTTCC
GAAGGCTTCG TCAAGAACCT TGAAATCGTC GGCGTCGGTT TCCGTGCCGC CGTCAAGGGC
AACATTCTGG ATCTGAACCT GGGCAAGTCC CATCCGATCA ACCAGGTAAT CCCGGAAGGT
CTCAAGGTAA CCGTGACTGA AAACACGAAA GTGACGGTCG AAGGCATCGA CAAGCAGGTC
GTAGGCCAGT TTGCCGCTGA AGTCCGTGCG TACTATCCCC CGGAACCCTA CAAGGGCAAG
GGTGTGCGTT TCGTCGGTGA AGTTATCCGC CGCAAGGAAG GCAAGAGCGT CGGTAAGTAA
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| Protein sequence | MSRVGKKSIT LPDKVTVKVN GSSVQVEGPK GKLSWTLPEG ITATVEGNQL SVDRAGESRQ
LRALHGTNRS LLNNMVIGVS EGFVKNLEIV GVGFRAAVKG NILDLNLGKS HPINQVIPEG
LKVTVTENTK VTVEGIDKQV VGQFAAEVRA YYPPEPYKGK GVRFVGEVIR RKEGKSVGK
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