| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amuc_0906 |
|---|
| Symbol | |
|---|
| ID | 6274261 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Akkermansia muciniphila ATCC BAA-835 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010655 |
|---|
| Strand | - |
|---|
| Start bp | 1081425 |
|---|
| End bp | 1082552 |
|---|
| Gene Length | 1128 bp |
|---|
| Protein Length | 375 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 642612960 |
|---|
| Product | methionine-R-sulfoxide reductase |
|---|
| Protein accession | YP_001877519 |
|---|
| Protein GI | 187735407 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0225] Peptide methionine sulfoxide reductase
[COG0229] Conserved domain frequently associated with peptide methionine sulfoxide reductase |
|---|
| TIGRFAM ID | [TIGR00357] methionine-R-sulfoxide reductase
[TIGR00401] methionine-S-sulfoxide reductase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 64 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGCGTA TTTACCACGG ACCATGGACA CTGGCCGGAC TGGCATGCGC CATTTTGGCC
GCAGTCGCCA TGCTCTCCTT TTTTTCCTGC GGGGAAAAAG GCCAGTCAAG CAGTAATGAC
AAACCTCATA TGGACAACAA GGATTTAAAA ACGATTTACC TGGCGGGAGG CTGTTTCTGG
GGAGTGGAAA AGTACTTCTC CCTGATGCCC GGCGTTAAGG AAACGGAAGC GGGATATGCC
AACGGCTCCA CGGCTTCTCC CACGTATGAA GAAGTATGCA GCGGGAAAAC GGGCCATGCG
GAAACGGTAA AAGTAGTATT TGACCCGGAA GAACTCAGTC TGCCCTTTCT TCTGGAACGG
TATTACTCCA TTATTGATCC TGTTTCCGTC AACAAACAGG GAAACGACAG GGGAATTCAA
TACCGCACGG GCATCTATTA CGCGGATGAG AAGGACAAAC CTGTTATAGA AACGTCCCTG
AAAAGGCTCC AGCAGCACTT CAGGCAGCCT CTGGCAATTG AAGTTCAGCC CCTCCGCCAA
TTTTCACGGG CGGAAAAATA TCATCAGCGC TATCTGGATA AAAACCCTGG CGGATACTGC
CATATTCCAC CCGCCAAATT CCGGGAAGCG TCCCAGGCCC GCGAAAACGA ACCTGTTTAC
CGGAAAAAAT CGGACGAAGA GCTGCGCCGC GTCCTGACAC GCGAGCAATT TGCCGTCACG
CGGAATAATG CGACGGAACC TCCCTTCCGC AATGAATATT TCAATAACGA CAGACCTGGC
ATTTATGTGG ACGTCACGAC AGGCGAACCT TTATTCCTGT CCACGGACAA GTTTGATTCA
GGCTGCGGCT GGCCCAGCTT CTCCCGCCCC ATCAAAGAAG AACTGATTCA GGAAAAACAG
GATTTCTCCC ACGGCATGAG GCGCACGGAA GTCCGCAGCA AAACGGGAGA CGCCCACCTG
GGCCACGTTT TCACAGACGG CCCGAAGGAA CAGGGCGGAC TGCGCTACTG CATCAACAGC
GCCTCCCTGA AATTCATTCC TGAACAGGAC ATGGAAGCAC AGGGTTATGG AAAATACCTT
CCCCTGCTGC ACCGGGAAGG AACAGACAGG AAAGCTGCGG AAAAATAA
|
|---|
| Protein sequence | MKRIYHGPWT LAGLACAILA AVAMLSFFSC GEKGQSSSND KPHMDNKDLK TIYLAGGCFW
GVEKYFSLMP GVKETEAGYA NGSTASPTYE EVCSGKTGHA ETVKVVFDPE ELSLPFLLER
YYSIIDPVSV NKQGNDRGIQ YRTGIYYADE KDKPVIETSL KRLQQHFRQP LAIEVQPLRQ
FSRAEKYHQR YLDKNPGGYC HIPPAKFREA SQARENEPVY RKKSDEELRR VLTREQFAVT
RNNATEPPFR NEYFNNDRPG IYVDVTTGEP LFLSTDKFDS GCGWPSFSRP IKEELIQEKQ
DFSHGMRRTE VRSKTGDAHL GHVFTDGPKE QGGLRYCINS ASLKFIPEQD MEAQGYGKYL
PLLHREGTDR KAAEK
|
|---|
| |