Gene Amuc_0905 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmuc_0905 
Symbol 
ID6274262 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAkkermansia muciniphila ATCC BAA-835 
KingdomBacteria 
Replicon accessionNC_010655 
Strand
Start bp1080489 
End bp1081052 
Gene Length564 bp 
Protein Length187 aa 
Translation table11 
GC content56% 
IMG OID642612959 
ProductErfK/YbiS/YcfS/YnhG family protein 
Protein accessionYP_001877518 
Protein GI187735406 
COG category[S] Function unknown 
COG ID[COG1376] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones62 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGAACG CAAAAAACAT CTTATCAATC ATAGCGGGAG CGTTGGCGCT GGCTGCCTGT 
TCTGGCCCGC AGGAAGAGAA TTTGCGCATA GTTCCCCTGA CCGTGCCTGC AACCGTACCC
ATGACCTCCT ACGGACCGCA CGCGAGGGTG GTCGTAGCAG GAATTGATTA TACGGAGGTG
CACGACGAAT GGATGAATCC CGATATCATG AAAAAGGCCA CCCCGGGCAA TACGCGCGTG
GTGATCAGCC GCGGACGCCA AAGGGGCCAG TTGATGGTGG GGGATGAGGT AGCCATGGAT
TTTCCCGTTT GCGTGGGTAA GGCTTCCCAC CGCACGCCCG TGGGCCATTT CCGCATTACG
GAAAAGGCAG TGCATCATGT TTCCAATTTG TATGATGCCT CCATGCCTTA CTTCATGCGG
CTGACGGACA GCGGCATTGG GATGCACGTA GGCCCTGTTT TCCAGACGCC GCAGTCCCAT
GGGTGCATCC GCATGACCCG CTCTTCCTGC GTGCCGCTTT TCAAAACCGT TAAGGTAGGC
ACGCCCGTTA CGATTGTACA GTAA
 
Protein sequence
MMNAKNILSI IAGALALAAC SGPQEENLRI VPLTVPATVP MTSYGPHARV VVAGIDYTEV 
HDEWMNPDIM KKATPGNTRV VISRGRQRGQ LMVGDEVAMD FPVCVGKASH RTPVGHFRIT
EKAVHHVSNL YDASMPYFMR LTDSGIGMHV GPVFQTPQSH GCIRMTRSSC VPLFKTVKVG
TPVTIVQ