| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amuc_0879 |
|---|
| Symbol | |
|---|
| ID | 6274289 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Akkermansia muciniphila ATCC BAA-835 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010655 |
|---|
| Strand | + |
|---|
| Start bp | 1050194 |
|---|
| End bp | 1050991 |
|---|
| Gene Length | 798 bp |
|---|
| Protein Length | 265 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 642612934 |
|---|
| Product | glycosyl transferase, WecB/TagA/CpsF family |
|---|
| Protein accession | YP_001877493 |
|---|
| Protein GI | 187735381 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1922] Teichoic acid biosynthesis proteins |
|---|
| TIGRFAM ID | [TIGR00696] bacterial polymer biosynthesis proteins, WecB/TagA/CpsF family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 79 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACTATTC CAGACAATTT TGACCGTCCC GGCGCGCGGA TACCGTGCGA AACCAGAAAC
GTATTCGGCT TTTCCGTAGC CGTCAGTTCC GTGGAAGAGA TGTCCGCTGC GCTGGCGGAA
CGCGCGCTGG AGGCGGAAGC TCCGTTTCTG GTGGCCGCGG CGGATGCCCA TGTGGTAACC
CTCGGCGTGC ATGACCGGGA TTACGGGAAC GTGCTGGAAC GGATGGACGT GATTTGCCCG
GACGGTATGC CGGTAGTGTG GAGGCTGAAC CGGAGGCTTT CTTCCGGGGG GGAAAGGGAA
GCGTGCCGTG TGAGCGGGCC GGATTTGATG GAAGCGCTGG TGCGTTCGAA TGTGCAGTAT
CCGGGCTTGC GCCATTTTTT GCTGGGCGGG GATGAGAAGC TGCTGGAAGC CCTGTCTGGG
GCATTAAAGG AAAAATACCC CGGTTTTCAA CTGGCCGGGG CGTATTCTCC TCCGTTCCGC
CCTTGGACGG AGGAAGATCT GGAAAACATG CGGGAGGCGG TTGCTTCAAG CGGGGCCAAT
GTGGTATGGG TGGGGCTGGG CTGCCCGAAA CAGGAGCGGT GGATGGCGGA GCAGAGGGAA
TTGCTGCCCC CCGCGGTTTA TGTGGGCGTA GGGGCGGCGT TCGCTTTCCA TGCCGGTACG
GTGAAACGGG CTCCGCGATG GATGCAGAAG AACGGTCTGG AATGGTTGTA CCGCATTTAC
CGGGAGCCGG GAAGACTGCT CAGGCGGTAC GTGAAGCACA ACAGCCTGTT CGTGTGGTAC
GTGCTGACGG GCAGATGA
|
|---|
| Protein sequence | MTIPDNFDRP GARIPCETRN VFGFSVAVSS VEEMSAALAE RALEAEAPFL VAAADAHVVT
LGVHDRDYGN VLERMDVICP DGMPVVWRLN RRLSSGGERE ACRVSGPDLM EALVRSNVQY
PGLRHFLLGG DEKLLEALSG ALKEKYPGFQ LAGAYSPPFR PWTEEDLENM REAVASSGAN
VVWVGLGCPK QERWMAEQRE LLPPAVYVGV GAAFAFHAGT VKRAPRWMQK NGLEWLYRIY
REPGRLLRRY VKHNSLFVWY VLTGR
|
|---|
| |