Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amuc_0806 |
Symbol | |
ID | 6274371 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Akkermansia muciniphila ATCC BAA-835 |
Kingdom | Bacteria |
Replicon accession | NC_010655 |
Strand | + |
Start bp | 945359 |
End bp | 947107 |
Gene Length | 1749 bp |
Protein Length | 582 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 642612856 |
Product | H(+)-transporting two-sector ATPase |
Protein accession | YP_001877420 |
Protein GI | 187735308 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0168] Trk-type K+ transport systems, membrane components |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.580888 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 57 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACCACTA CACGCTCGGG ATTCACCAAA CTTGCAGCCG TCTGCATTGC CATTCTTCTG GGGGCGGTGG TCTGGGAGCT GGGCTGGCCC CTGACGCGGG CGGAACATGA GTGGTCGCGG CTGATTGCAG CCGTTGCCAC GCTGGGCCAC CTGACGGGCA TTCTGGGTTC CTATTTCCGG AAGGAAATCA ACCGCCCTTC CCTGAGGCTC CTGATTTTCC AAATCATCAG CTGCCTCATG ATTTTTCTCC TGATTGCCAG GGAACAACAG GAAGCGGGAT ACATGAGGTT CACGGAGCTT TCCCGCCTGG TGATTACGGC CGGGCTGATT GCCATCCCCA CGCTGATGTC CCTGACCAGG ATTTTTGAAT GGCTGGTGGG CAAGCAAAAA AAAGGCCGGC CTCTTATGGC CCCCGCCATG CAGTTTGTAG CTTCTCTGGG AGTAGTCATC CTGGCAGGCA CCGGATTGCT TCTGCTGCCT AATTCCACAT ATCCGGGTAT TACACTCAGT TTTACGGATG CCCTGTTCAC CAGCACCAGC GCAGTATGCG TCACCGGTCT GAACGCCGTG GATTTTGCCC ATACTTTCAC CCCGCTGGGA GAAATGTTCA CGCTTGCCCT TATCCAGATT GGCGGATTCG GCATCATGAC GTTCGCCTAC TTCGTAGCCA TGATGGCAGG CCAGGGTTTT TCCCTGAGGG ACCGCGTGCT GCTGACGGAT CTGCTTGATG AAGACAACCT GGGGGCCGTC GTCTCCTTTA TTACCACTAT TGTGGTCAGT ACGCTGTTCA TCGAACTGTG CGGCGCCGTC CTTCTTTATT TCTCCTGGGA AGGGAAGGAC ATCAACCTGA TGGGGGAGCC TTTGTGGTGG CATTCCCTGT TCCACTCCGT TTCCGCCTTT TGCAATGCTG GTTTTTCAAC TTTCCCGATG AATTTGATGG AGCCGGGCAT CCGCCTGTGC TACAGCGGGC AGGCGGTCAT CATGGCGCTG ATCGTATGCG GCGGCCTGGG ATTCGGCATT TACAAGGAAA TCAATTCACG CCTGGCAAAC CGCTTTTTTT CCAAACACCG CCGCCTGCAC ATGCAGTGGA CCCCTTATTT CAAACTGGTG ATGATCTCCA CGGGGATTTT GCTGGCGGGA GGCGCCCTGG CCATCTTTGC CGTTTCCTCT CCCCATGCCG CGGAACCGTT GGGGGAACAC CTCTGGATTT GCCTTTTCGA CAGCGTCACG GCACGCACGG CGGGATTCAA TATCAGCGAC TACGGCCGCT ATCTGCCCGC AGCCAGCCTC ATTATGTGCG GTCTGATGAT GGTGGGAGGC AGCCCCGGCG GCACGGCAGG CGGCATGAGA ACCACTACCT GCGCCATTGC AGGTGCGGAA ATCCTGCGCA TCCTACGCGG CAGGGATCAT GTGGAATTCT TCCGCCGCCG CATCGACCAG CGCACCGTGG CGCGCTGCGT AATTACCGTG GTGGTCTCCT GCGCCTGGAT CGGCTGCTTT ACCGTCCTGA TTTGCGCCTT GGAGCCCTCC ATGAGCTCTC TGGATATCTT CTTTGAAAAC TGCAGCGCTT TTGCTACGGT AGGCGTGTCG CGGGGCATTA CTCCAGATTT AAGCGGCCCT TCCAAATACC TTCTTATCGT CAACATGCTC GCCGGCCGCG TGGGGCTCTT CGCTTTTCTC ATTGCGCTGG CCGGCACCCC TACTCCGAGG CATTACCGCT ATCCATCCGT CAAAATCCCG TTAACCTGA
|
Protein sequence | MTTTRSGFTK LAAVCIAILL GAVVWELGWP LTRAEHEWSR LIAAVATLGH LTGILGSYFR KEINRPSLRL LIFQIISCLM IFLLIAREQQ EAGYMRFTEL SRLVITAGLI AIPTLMSLTR IFEWLVGKQK KGRPLMAPAM QFVASLGVVI LAGTGLLLLP NSTYPGITLS FTDALFTSTS AVCVTGLNAV DFAHTFTPLG EMFTLALIQI GGFGIMTFAY FVAMMAGQGF SLRDRVLLTD LLDEDNLGAV VSFITTIVVS TLFIELCGAV LLYFSWEGKD INLMGEPLWW HSLFHSVSAF CNAGFSTFPM NLMEPGIRLC YSGQAVIMAL IVCGGLGFGI YKEINSRLAN RFFSKHRRLH MQWTPYFKLV MISTGILLAG GALAIFAVSS PHAAEPLGEH LWICLFDSVT ARTAGFNISD YGRYLPAASL IMCGLMMVGG SPGGTAGGMR TTTCAIAGAE ILRILRGRDH VEFFRRRIDQ RTVARCVITV VVSCAWIGCF TVLICALEPS MSSLDIFFEN CSAFATVGVS RGITPDLSGP SKYLLIVNML AGRVGLFAFL IALAGTPTPR HYRYPSVKIP LT
|
| |