| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amuc_0718 |
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| Symbol | |
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| ID | 6273860 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Akkermansia muciniphila ATCC BAA-835 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010655 |
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| Strand | + |
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| Start bp | 847267 |
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| End bp | 847932 |
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| Gene Length | 666 bp |
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| Protein Length | 221 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 642612770 |
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| Product | HAD-superfamily hydrolase, subfamily IA, variant 1 |
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| Protein accession | YP_001877336 |
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| Protein GI | 187735224 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0546] Predicted phosphatases |
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| TIGRFAM ID | [TIGR01549] haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.00000286264 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 60 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCAAAA CCGCCATTTT TGATTTTGAC GGAACTCTTG CCGACACCAT ACCCCTGTGC
CGGGAGGCTT TTCGCCGCGC TATCCGGAAG CTGGACGGCA GAATATTGAC GGATGAAGAA
ATCGAACGCC AATTCGGCCC GGACGATCTG GGAGTTATCC AGAAATTGAT TCCCGGGAAA
CCGGAACTGC ATGAACGCGG CAGGGAACTA TTTATCCACT ATTACCGCAA GCTGCACGCA
GACCTGGCTC CCGCCCCCTT TCCCGGAACA GCCGAATTGC TGAGCACTCT CCGCAACCTC
GGCATTCGGC TGGCCATGGT CACAGGCAAA CGCCTGGAAA GCGCAGAGAT ATCCCTCCAG
TTTTTTCATC TGTCCGAATT TTTTCCTATT CTGGAAACAG GCTCCCCGGA GGGAGGCGTA
AAACCGGACC GCATCAAACG GGCTTTGTCC CGTCTGAATG CCGTCGCCTC AGAAGCCATC
TATATTGGAG ACGCCCCCAC AGACGTGGAC GCATGCCGCT CTGTCCCTAT CCGCATTCTC
TCCGCAGGAT GGGCCGAGGA GGCGGACATC AACGGCCTCA GGGAAAAAAA GCCGGACTTT
CTCCTGACCC GTTTTGAAGA CCTGGAACGT TTCTTCCGGG AACATCATGA AAATGAAGGC
CTTTAA
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| Protein sequence | MIKTAIFDFD GTLADTIPLC REAFRRAIRK LDGRILTDEE IERQFGPDDL GVIQKLIPGK
PELHERGREL FIHYYRKLHA DLAPAPFPGT AELLSTLRNL GIRLAMVTGK RLESAEISLQ
FFHLSEFFPI LETGSPEGGV KPDRIKRALS RLNAVASEAI YIGDAPTDVD ACRSVPIRIL
SAGWAEEADI NGLREKKPDF LLTRFEDLER FFREHHENEG L
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