| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amuc_0654 |
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| Symbol | |
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| ID | 6273984 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Akkermansia muciniphila ATCC BAA-835 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010655 |
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| Strand | + |
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| Start bp | 768948 |
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| End bp | 770321 |
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| Gene Length | 1374 bp |
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| Protein Length | 457 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 642612706 |
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| Product | UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate/D-alanyl-D-alanyl ligase |
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| Protein accession | YP_001877272 |
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| Protein GI | 187735160 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0770] UDP-N-acetylmuramyl pentapeptide synthase |
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| TIGRFAM ID | [TIGR01143] UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 76 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATTTCCC TCACGGCACA CGGCATCAGC AACGTCATCG GCGGAAAACT GGTCAGCGGC
CCCTTCGACA GGGTCGCTTC CGGCGGCGTG TGCACGGACA GCCGCCATTT GCCGCCCCAT
GCCGTTTTCT TCGCGCTGGG GGGAGAAAAA TTTGACGGAA ACCTGTTTGC CCCGGAGGCA
TCCCGTACTG CGGCCGCCGT CGTCGTCAGC CGTGTGGAGG AAGGCATGGA CCCCTCCTGC
GCCGTCATTC TGGTGGAAGA CACGCTGGAA GCCCTTCAGA AGCTGGCCTC CTGGTGGCGT
TCAGAGCTTA CCCTCACCGT CATCGGCCTG ACCGGCTCCA ACGGAAAAAC CTCTACCAAG
GATCTGACGG CCTCCGTTCT TTCACAGGGG TTCCGCACCA TCGCCACGCA GGGCAACCTG
AACAACCACA TCGGCGTCCC CCTCAGCATC CTCCGGGCCA CCCCGTCCGA CGAAGCCGCC
GTATGGGAAA TGGGCATGAA CCACTCCGGG GAACTGGCTC CCCTGTGTGA AATGACGCGC
CCGAAAATCG GCATCATCAC CAGCATCGGC ACCTCCCACA TGGAATATCT GGGTTCGCGG
GAAAACATCG CCCGGGAAAA ATGCACGTTG GCACGCTGCC TGCCGGAAGA CGGCTTCATG
ATTTTTCCGG CGGACTGCGA TTATGCGGAT ATGATCCGTC AATCCACCCG CGCCGCCTGT
ATTGACTGCG GCATTGGCGC CGGAACCGTT CGCGCGGAAA ATCCCGTCTC TACCGAGAAC
GGGACACGCT TCATCCTTTC CATCCCGGAT TTCTGCCGGG AAGAGGTGGA ATTGCCCGTC
CACGGCCGGC ACATGGTAAC CAATGCGCTT CTGGCCGCCG CCGCCGGCTG GGCGGCAGGT
CTTGCGAAAG AGCAAATCGC CTCCGGCCTC AATCAGGCGC GGCTCACGGG CGGCAGGCTT
CACTGCACCC GGATCAACGG CATTCTGGTA GTGGATGACA CCTACAATGC CAACCCGGAT
TCCATGCAGG CCGCCCTGCA TACCGTAGCG GGGCTTTCCT GCACCGGCAG ACGCTTTGCG
GTGCTGGGCA GAATGGGGGA ACTGGGCGCG TTTTCCGAGG AAGGGCACGT TCTGGTGGGC
CGCACGGCGG AAGAGCTCCG TCTTGACTGC GTCGTCAGCG TGGGAACGGA TGCCGCCCGG
ATTACGGACG CTATTTCTCC GAACGCCTTC ACTCAAAGCC TGCATTTCGG CTCTGCGGAG
GAAGCGGCAG AATGGCTCCG CAGCCATACG GCGCCGGGAG ACATCGTCCT CTTCAAAGGC
AGCCGCCTCG CCCGGATGGA GCAAGTCATG AACCTCACCT TTCCGCCACA GTAA
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| Protein sequence | MISLTAHGIS NVIGGKLVSG PFDRVASGGV CTDSRHLPPH AVFFALGGEK FDGNLFAPEA
SRTAAAVVVS RVEEGMDPSC AVILVEDTLE ALQKLASWWR SELTLTVIGL TGSNGKTSTK
DLTASVLSQG FRTIATQGNL NNHIGVPLSI LRATPSDEAA VWEMGMNHSG ELAPLCEMTR
PKIGIITSIG TSHMEYLGSR ENIAREKCTL ARCLPEDGFM IFPADCDYAD MIRQSTRAAC
IDCGIGAGTV RAENPVSTEN GTRFILSIPD FCREEVELPV HGRHMVTNAL LAAAAGWAAG
LAKEQIASGL NQARLTGGRL HCTRINGILV VDDTYNANPD SMQAALHTVA GLSCTGRRFA
VLGRMGELGA FSEEGHVLVG RTAEELRLDC VVSVGTDAAR ITDAISPNAF TQSLHFGSAE
EAAEWLRSHT APGDIVLFKG SRLARMEQVM NLTFPPQ
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