| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amuc_0546 |
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| Symbol | |
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| ID | 6275201 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Akkermansia muciniphila ATCC BAA-835 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010655 |
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| Strand | - |
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| Start bp | 647272 |
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| End bp | 647730 |
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| Gene Length | 459 bp |
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| Protein Length | 152 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 642612596 |
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| Product | Biopolymer transport protein ExbD/TolR |
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| Protein accession | YP_001877165 |
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| Protein GI | 187735053 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0848] Biopolymer transport protein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.00922706 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 47 |
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| Fosmid unclonability p-value | 0.113975 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCAAGAC ATAAAAAACT GGAAACGGTT GAGGATGAAG ATCCCAAGCT GGATATTTCC
TCTCTCATCG ACGTATGTTT CCTTCTGCTG ATTTACTTCA TTGTAGCGAC CTCTCTGATT
CAGGAACGCA AATTGGATAT GTCCATGCCA GGGCAGTCCG TGAGCGAAAA TGCCTCCCAG
ATTGAACCGG CACTGATCCG CATTATCAAG GACGGCACCA TTTACTGGGG CAAGGACAAC
AGCCTGATGA TCGACAATGA CATGAACAAC CACAACCTGG CGACGCTCGT CCAGCAGCTG
GAAGCCAAAA AACAGGAGGC CAGCGCTGTA GGCACCAAGC CGGTAGTGCA GTTGTGGGTA
GAAGGGGATG TCCCCCACCA GCGCGTTATT GACGTCATGA ACGCGTTGAC GGAGGCCGGG
ATTACAACGG TGGCTCTGAC CGACCTTAAG GACGACTAA
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| Protein sequence | MARHKKLETV EDEDPKLDIS SLIDVCFLLL IYFIVATSLI QERKLDMSMP GQSVSENASQ
IEPALIRIIK DGTIYWGKDN SLMIDNDMNN HNLATLVQQL EAKKQEASAV GTKPVVQLWV
EGDVPHQRVI DVMNALTEAG ITTVALTDLK DD
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