Gene Amuc_0463 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmuc_0463 
Symbol 
ID6274717 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAkkermansia muciniphila ATCC BAA-835 
KingdomBacteria 
Replicon accessionNC_010655 
Strand
Start bp550779 
End bp551318 
Gene Length540 bp 
Protein Length179 aa 
Translation table11 
GC content56% 
IMG OID642612513 
ProductPhosphopantothenoylcysteine decarboxylase 
Protein accessionYP_001877082 
Protein GI187734970 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0452] Phosphopantothenoylcysteine synthetase/decarboxylase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.64431 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones60 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCTGCA TCATTCTGGG CGTCACCGGC TCCATTGCCG CATACAAAGC GGCGGATATC 
GCTTCCGCCC TGGTCAAATA CGGTCATGAA GTGCACTGCG TCTGCACAGC CAAGGCCCTT
GAATTCGTCA CTCCCCTCAC CCTGCACACG ATTTCCCGCA ACCCCGTCTT TTCCTCCTTT
GAGGATGAAA AGACGGACTG GGTTCCCCCA CACATCCAAC TGGCCCAACG GGCGGATCTT
CTGCTTGTAG CCCCAGCCAC GGCAAACACC ATGGCCAATT TTGCCCATGG CTTCGCTCCG
GACATGCTCA GTTCCCTCTA CCTGGCTTGC CAGTCTCCGG TGCTTATTTG CCCAGCTATG
AACGTCCACA TGTGGGAACA TGCGGCCACG CAGCAAAACG CGGCCGTTCT GAAGCAAAGG
AAGGATCATT ACATCCTCGG CCCCAGTGAA TCCGGAATTC TGGCCTGCGG AGCGGAAGGC
GCGGGAAAAC TCATGCCGGT GGACAAGATT ATTCAAAAAA CACTCTCCCT TCTGCCGTAA
 
Protein sequence
MACIILGVTG SIAAYKAADI ASALVKYGHE VHCVCTAKAL EFVTPLTLHT ISRNPVFSSF 
EDEKTDWVPP HIQLAQRADL LLVAPATANT MANFAHGFAP DMLSSLYLAC QSPVLICPAM
NVHMWEHAAT QQNAAVLKQR KDHYILGPSE SGILACGAEG AGKLMPVDKI IQKTLSLLP