Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amuc_0438 |
Symbol | |
ID | 6275755 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Akkermansia muciniphila ATCC BAA-835 |
Kingdom | Bacteria |
Replicon accession | NC_010655 |
Strand | - |
Start bp | 521803 |
End bp | 522354 |
Gene Length | 552 bp |
Protein Length | 183 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 642612488 |
Product | ribosomal protein S11 |
Protein accession | YP_001877057 |
Protein GI | 187734945 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0100] Ribosomal protein S11 |
TIGRFAM ID | [TIGR03632] 30S ribosomal protein S11 |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.00108118 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 83 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTAGCG AAGAAATCAC CAACGAAACC GCCGAACAGC CTGTGGAAGC GGCAGCTTCC GCTCCCGTCG CTGAAACTCC GGCCGCCGCT GTTTCCGCTC CTGAAGAAAT CAAGAAGCCC GAACCCCGCA AGGATATCTT TGCGGAACTT GGTCTGGGCG GCGATGATGA CAAGCCCAAA ATCCTGAAGG CCAAGGGCAG CAAAAACGTT TCCACGGGCG TGGTTCACGT TTCCTCCACG TTCAATAACA CCGTCGTAAC TGTGACTGAC CAGCGCGGCA ATGTCATCGG CTGGTCCTCC GCCGGCAAGA TGGGCTTTAA GGGTTCCCGC AAGAGCACGG CCTATGCCGG GCAGGTGGTG TGCCAGGACG CCTGCCGCCA GGCCATGGGT CACGGCTTGC GTGAAGTGGA AGTGCGCGTA AAGGGGCCCG GTTCCGGTCG TGAATCCGCC GTACGTGCCG TGCAGACGAT CGGTATTGAA ATCACCTCCA TCAAGGACGT GACCCCCATC CCCCACAACG GCTGCCGTCC TCCGAAGGCC CGCCGCGTCT AA
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Protein sequence | MASEEITNET AEQPVEAAAS APVAETPAAA VSAPEEIKKP EPRKDIFAEL GLGGDDDKPK ILKAKGSKNV STGVVHVSST FNNTVVTVTD QRGNVIGWSS AGKMGFKGSR KSTAYAGQVV CQDACRQAMG HGLREVEVRV KGPGSGRESA VRAVQTIGIE ITSIKDVTPI PHNGCRPPKA RRV
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