Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amuc_0382 |
Symbol | |
ID | 6274858 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Akkermansia muciniphila ATCC BAA-835 |
Kingdom | Bacteria |
Replicon accession | NC_010655 |
Strand | - |
Start bp | 457994 |
End bp | 460138 |
Gene Length | 2145 bp |
Protein Length | 714 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 642612433 |
Product | Polyribonucleotide nucleotidyltransferase |
Protein accession | YP_001877002 |
Protein GI | 187734890 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG1185] Polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase) |
TIGRFAM ID | [TIGR03591] polyribonucleotide nucleotidyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.320403 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 78 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCATAC ATTCAGTTGA ATGCAACGTT GGTACGAATC CTATCACGAT TGAAACCGGC AAGATGGCCC GTTTGGCGGA CGGTGCTGTT GTTGTCCGCA GCGGCGATAC CGTCGTTCTT GTGACCGTGG TAAGCGCCAC CAAAGTCAAG GAAGGGCAAA CCTTCTTCCC CCTGTCCGTG GAGTACAAGG AAAAGGCCGC TGCGGCGGGT ATGTTCCCCG GCGGCTATTT CAAACGCGAA GGGCGTCCCA CGGAAAAGGA AATCCTGACA TGCCGCATGA CGGACCGCCC CCTGCGCCCG ATGTTCCCCA AGGGCTACTT CTACGATACG CAGGTAATTA CGCTTCTGCT CTCCGCCGAT GGTGAAAACG AACCGGACAT CCTGAGCATT AACGGCGCTT CCGCCGCCTG TGTCGTTTCC GATCTTCCCT TTGCCGAACC CGTAGGGGCT GTGCGTGTGG GCCGTATTGA CGGACAGTTT GTTATCAATC CGACCAACTC CCAGCGTGAA CATAGTCAGC TGGATCTGGT ATTTGCCGGC ACGAAGGATC AGGTCATCAT GATTGAAGGT TCCGCTAATG AACTGCCGGA AGAAGATTTT ATCGCCGCTT TGCGTGTCGC CCAGGAGAAC GTGAAGGTCA TTTGCGAAAA GCAGGAAGAG CTCCGCGCCG TTTGCGGTAA GGAGAAGCGC GCTTATGAAC TTTGCCTTGC CAAGCCGGAA TTGCTGGAAA TCGGCTATGA AATTGCCGGC GATCGTATTG AGGAAGCCAT TTACGCCCCT TCCAAGGTGG AGCGTCAGAA AAAAGTGGGG GCCCTGCGTG ACGAAGTGGA GGCCGCCATC AAGGAACGCC ATCCGGAAGC TACTGACTTT GATGTGGAAC AGGTTTTTGA ATATATTCAG AAAAAGGCTT TCCGCATCTC CATCATGGAA AAGGACAAGC GGGCCGATGG CCGGGCTCTC AAGCAGCTGC GCCCTCTGAC TGCGGAAGTC AATGTGCTGC CTCCTGTGGT GCACGGTTCC GCGATGTTCG CCCGCGGTGA AACGATGTCC CTTTGCCTGG CGACGCTCGC TCCGATGGAA GAACGCCAGT ACATGGACAA TTACACGGGC AGCGTGAATG AAAAGCGTTT CATCCTGCAC TACAATTTCC CGCCTTTCTC CGTGGGAGAC ACCGGCCGTT TCGGCGGTCA GAACCGCCGG GAAATCGGCC ACGGCGCTTT GGCGGAACGT TCCATCGCTC CGGTCGTGCC TGGCGAACAG GAATTCCCGT ACGCCATTCG CGTCTCTTCT GAAATCATGG AATCCAACGG TTCCACCTCC ATGGCTTCCG TCTGTGCGGG CACGATGTCT CTGCTGGCGG CCGGCGTGCC CCTCAAGCGC CCTGTAGCGG GTATTTCCGT GGGCCTGGTG ACGGAACAGA ATGACCAGCA TGAAATCACC TCTTACAAAA CTCTGCTGGA TATCATCGGT TCCGAAGACT TTTACGGTGA TATGGACTTC AAGCTCTGCG GCACGTCGGA AGGCGTGACA GGCTACCAGC TGGACCTCAA GCTGCCCGGC ATTCCCCTCT CCATATTGGA GGAAGCCATT CACGTGGCGA AAGCCGGCCG CACGGATGTT CTGAAGGTCA TGAATGAAGC CATTGCAGCT CCGGCCCAGA TGAGCCCGAA TGCTCCCCGT ATTGAGACCA CCAAAATTCC CGCCGACCGC ATTGGCGAAC TGATCGGCCC CGGCGGCAAG AACATTAAGG CTATTCAGGC CGAATCCGGC GCCGATATCA ATATCGAGGA AGATGGCACC GTGCATATTT ACGCCGCCAA GCAGGAAGGC CTGGACCGTG CTCTGGAATT GGTCACCCGC ATGTTCAAGA CCATTGAAAT CGGGGAACTG TACACCGGTA AGATTGTTTC CACGACCACC TTTGGAGCGT TTATGGAAGT GCTGCCCGGC AAGGATGGCC TGATTCATAT CTCCGAACTG GCCGAAGGCC GCACCGCCAA GACGGAGGAC GTCGTGAGCG TCGGAGACGT GGTGACCGCC AAGTGCATTG GTATTGACGA CAAGGGACGC GTGAAAATGT CCATACGTGC CGCTTTGCGA GATGCCAAGG CTGCCGAAGC AGAAGCCGCC GGCATTACGG AATAA
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Protein sequence | MSIHSVECNV GTNPITIETG KMARLADGAV VVRSGDTVVL VTVVSATKVK EGQTFFPLSV EYKEKAAAAG MFPGGYFKRE GRPTEKEILT CRMTDRPLRP MFPKGYFYDT QVITLLLSAD GENEPDILSI NGASAACVVS DLPFAEPVGA VRVGRIDGQF VINPTNSQRE HSQLDLVFAG TKDQVIMIEG SANELPEEDF IAALRVAQEN VKVICEKQEE LRAVCGKEKR AYELCLAKPE LLEIGYEIAG DRIEEAIYAP SKVERQKKVG ALRDEVEAAI KERHPEATDF DVEQVFEYIQ KKAFRISIME KDKRADGRAL KQLRPLTAEV NVLPPVVHGS AMFARGETMS LCLATLAPME ERQYMDNYTG SVNEKRFILH YNFPPFSVGD TGRFGGQNRR EIGHGALAER SIAPVVPGEQ EFPYAIRVSS EIMESNGSTS MASVCAGTMS LLAAGVPLKR PVAGISVGLV TEQNDQHEIT SYKTLLDIIG SEDFYGDMDF KLCGTSEGVT GYQLDLKLPG IPLSILEEAI HVAKAGRTDV LKVMNEAIAA PAQMSPNAPR IETTKIPADR IGELIGPGGK NIKAIQAESG ADINIEEDGT VHIYAAKQEG LDRALELVTR MFKTIEIGEL YTGKIVSTTT FGAFMEVLPG KDGLIHISEL AEGRTAKTED VVSVGDVVTA KCIGIDDKGR VKMSIRAALR DAKAAEAEAA GITE
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