| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amuc_0372 |
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| Symbol | |
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| ID | 6274901 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Akkermansia muciniphila ATCC BAA-835 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010655 |
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| Strand | - |
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| Start bp | 443237 |
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| End bp | 444637 |
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| Gene Length | 1401 bp |
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| Protein Length | 466 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 642612423 |
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| Product | glutamate decarboxylase |
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| Protein accession | YP_001876992 |
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| Protein GI | 187734880 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0076] Glutamate decarboxylase and related PLP-dependent proteins |
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| TIGRFAM ID | [TIGR01788] glutamate decarboxylase
[TIGR03382] Myxococcales GC_trans_RRR domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.231865 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 82 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTTGATC CAAATCAAAA ACCCGATACA GCCCGGGCGG AAAATTCCAT TTTCGGTTCT
CCGGAAGCAG ATAACCTTCT CCCCAAGGAT GAGTTCCCGG ATTATGCAAT GCGCGCGGAG
GACGCTTTCC AATTGGTGTC CGATGAATTG ATGCTGGACG GCAATGCCCG CCAGAATCTT
GCAACCTTCT GCCAGACCTG GGATGAAAAG CAGGTCAGGA TGCTGATGAA TCTCAGCATT
AACAAGAACA TGATTGACAA GGATGAATAT CCCCAGACAG CCGCTATTGA GATGCGTTGC
GCTGCCATTA TTGCCAATCT TTGGAATGCC AGCCAGAATG AAAAGCCTAT TGGTTGTTCC
ACTATCGGTT CCAGTGAAGC ATGCATGCTT GGAGGCATGG CCGCCCTGTG GCGCTGGAGA
GCCCGCCGGA AAGCCGCCGG CAAACCCATT GACAAGCCCA ACCTGGTATG CGGCCCTGTC
CAAATCTGCT GGCACAAGTT CTGCCGCTAT TGGGATATTG AAATGCGTGA AATCCCGATG
GTGCCCGGAA AATGGAAGAT GGATGTTGAC CGGATGCTGG AACAGATTGA TGAGAACACC
ATCGTTGTGG TTCCCACGTT CGGAGTGACC TATACGGGTG CTTATGAATT GCCGGCGGAG
ATTGCCAAGG CCCTGGATGA TTATGAAAAC AAGACCGGCA TCAGCGTTGA CATCCATGTA
GATGGAGCCA GCGGCGGTTT CCTTGCTCCG TTCTGCGCCC CGGATCTTGT CTTTGACTTC
CGCATTCCCC GCGTCAAGTC CATCAGTGCT TCCGGCCATA AATACGGATT GGCTCCGCTC
GGAGTGGGCT GGGTCGTTTG GAGAGATATT TCCGAACTGC CTGAAGGGTT GATCTTCAAT
GTCAACTATC TTGGCGGGGA AATTCCCAAT TTTGCCATTA ACTTCTCACG ACCGGCCGGA
CAGATTATCT GCCAGTATTA TGATTTCATC CGACTGGGCA AGGAAGGCTA TACGAACATC
CATACACAGG CCTACGAAGT AGCGAAGTAC ATTTCAGATG AGCTTTCCAA ACTGGGGCCG
TATGAATTCA TTTGTACGGG CGATCCGGAA AAAGGTATTC CCGCCGTCTG CTTCTTCATC
AAGGATGGAG CCCGTGCGAA CTACACGCTC TTTGACCTTT CGGACAAGCT GAGAACCCGC
GGTTGGCAGG TGCCCGCCTT CACGCTCCCT GCCAACTGTC AGGATACGGT GGTGATGCGC
GTCATGGTTC GCCAGGGCTT CTCCAAAGAT TTGGCAGACC TGTTCCTGGA AGACTACAAG
CGCATGCTCT CTTTCTTCGA GAAACACCCG GTCTCTTCTC CGATGACGGC GGAAGAAGGA
ACGGCTTTCC ACCATTCCTG A
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| Protein sequence | MFDPNQKPDT ARAENSIFGS PEADNLLPKD EFPDYAMRAE DAFQLVSDEL MLDGNARQNL
ATFCQTWDEK QVRMLMNLSI NKNMIDKDEY PQTAAIEMRC AAIIANLWNA SQNEKPIGCS
TIGSSEACML GGMAALWRWR ARRKAAGKPI DKPNLVCGPV QICWHKFCRY WDIEMREIPM
VPGKWKMDVD RMLEQIDENT IVVVPTFGVT YTGAYELPAE IAKALDDYEN KTGISVDIHV
DGASGGFLAP FCAPDLVFDF RIPRVKSISA SGHKYGLAPL GVGWVVWRDI SELPEGLIFN
VNYLGGEIPN FAINFSRPAG QIICQYYDFI RLGKEGYTNI HTQAYEVAKY ISDELSKLGP
YEFICTGDPE KGIPAVCFFI KDGARANYTL FDLSDKLRTR GWQVPAFTLP ANCQDTVVMR
VMVRQGFSKD LADLFLEDYK RMLSFFEKHP VSSPMTAEEG TAFHHS
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