Gene Amuc_0350 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmuc_0350 
Symbol 
ID6274958 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAkkermansia muciniphila ATCC BAA-835 
KingdomBacteria 
Replicon accessionNC_010655 
Strand
Start bp413842 
End bp414918 
Gene Length1077 bp 
Protein Length358 aa 
Translation table11 
GC content59% 
IMG OID642612401 
Productputative ATP-binding protein 
Protein accessionYP_001876970 
Protein GI187734858 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.607954 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones56 
Fosmid unclonability p-value0.712412 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATACATG ACCTACTGGT GAGCGGCGTG ACGGTGTTTC CCGGGAGAGA GCATTTTGAG 
TTTGTTCCGG GAATCAATGT GGTGGTGGGA GGCAATGATT CCGGCAAAAG CCATTTGCTG
AAATTATGCT ATACCGTGGC CAAGTGGAGC GCTGACGGGG GGAGAAAATC CCTGCCGGAA
AAATGGGCGG AGGAGCAGCG GCTCAGAAAA GACCTGATGC GGGTGTTCGC GTCCCGCGGG
CTGGCCGGGC TGACGGCCCG GAACCGGGGA AACGCCCATG CGCGCGTGGA GGCCTCCATG
GAGGGGGACG GCGTGCCGGA GGGCATGGGG AACCTGGTGT TTGATTTCCA GGCGGGGCAT
GAAGAGGAGG GGCTGAGCAT CCGGGAAATG CCCCGGCGTT TTCTGAACGT GCCGGTGGTG
TTCCTGGCAG CGCGGGAGGT GCTGACCATT TATCCGAGTT TTGTGCAGGT GGGAAGCAGA
TTCCCCGAAT TTCTGGACGG CGGCAGTTGG GACCTCTGCC GTTATCTGGA TATGGAGGCG
GAAGCGGAGC CCATCAGTAC GGATGCCGGG CGCGTGGTTG CCAGGCTGGA AAAAATCATC
GGGGGGAAGG TGGTGAAGCG TGACGGGCGG TTCTTTTTGC AGCGTCCCGG ACAGCAGCCG
ATAGAAATGA GCCTGGTGGC GGAAGGATTC AAAAGGCTGG GAACGCTGAG CTACCTGATC
CGGAACGGTT CCGTGAAAAA AGGTTCCGTC CTGTTTTGGG ATGAACCGGA AATGAATCTG
AACGCCTCCC ACCTGCCCGT GCTGGTGAAA ACCCTGACGG GGCTTGCCAA GACGGGGGTG
CAGGTTATTT TGTCCTCCCA CAGCCTGTTC CTGCTGCGGG AGCTGATGAT TCAGCTTTCC
GAACCCCGCA ATGCCATGGT GCAGAGAAAG TTTTTCGGGA TGAGCGTGCC GCGGGGGGAA
CGTTCCGGGG TAAGGGTGTC CTGGGGGGAA TCCCTGGAGG ACGTGGGACC TGTCGAGTCT
CTTGAAGCGG AAATCGAACA GGCGGACAGG TATTTGAAGC TGAGTTATGA GTCATAA
 
Protein sequence
MIHDLLVSGV TVFPGREHFE FVPGINVVVG GNDSGKSHLL KLCYTVAKWS ADGGRKSLPE 
KWAEEQRLRK DLMRVFASRG LAGLTARNRG NAHARVEASM EGDGVPEGMG NLVFDFQAGH
EEEGLSIREM PRRFLNVPVV FLAAREVLTI YPSFVQVGSR FPEFLDGGSW DLCRYLDMEA
EAEPISTDAG RVVARLEKII GGKVVKRDGR FFLQRPGQQP IEMSLVAEGF KRLGTLSYLI
RNGSVKKGSV LFWDEPEMNL NASHLPVLVK TLTGLAKTGV QVILSSHSLF LLRELMIQLS
EPRNAMVQRK FFGMSVPRGE RSGVRVSWGE SLEDVGPVES LEAEIEQADR YLKLSYES