Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amuc_0348 |
Symbol | |
ID | 6274960 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Akkermansia muciniphila ATCC BAA-835 |
Kingdom | Bacteria |
Replicon accession | NC_010655 |
Strand | - |
Start bp | 410440 |
End bp | 412878 |
Gene Length | 2439 bp |
Protein Length | 812 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 642612399 |
Product | ATP-dependent metalloprotease FtsH |
Protein accession | YP_001876968 |
Protein GI | 187734856 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0465] ATP-dependent Zn proteases |
TIGRFAM ID | [TIGR01241] ATP-dependent metalloprotease FtsH |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.845111 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 55 |
Fosmid unclonability p-value | 0.923404 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCACCCA GTCCTCCCCG TCCTCCCAAA TTTCCCGGCT CCGGCAGGCC CGAATCCCCC AACTGGGGCG TGTGGGTCAT GGTACTTCTC ATTGTAGGCG TCCTTGCGTT TGGCTTTTTC ACCCCTGAAT CTTTCGGGTT GGGCCCCCGC AAGGAAAATC TGGAATCCTT TGAAGCCCAG TATAAGGCGG GGCGCGTGGT GCTGAACGAC CCCAAGGCCC CCGTGGAAGT GGTGCTGAGC GAGAACGGTT CCGAAGGCGT TATTCACGCG CTGGTGTACA GGAAGGAAAT TCAGCCGAAG GTGGAAATGA CCCCCTTTGC GCTGACTTAT TCCATGTCCC TTCCGGACCG CGACAAGCCT TTGCTGAATG AACTTTCCGG CTACAGGGTG GTGGAGAGCC CGTACCGGAC GGAAGAGGGA AAGAATGTTT CCCTCATTCC TGAGGGAGCT CAGAAGCTTT CCGTGCCAGA ATTCAACCGC CTGGCCCTGG AAGGCCGCAT CGCCGGAGGA AAGGACGGCA TCATCCTGGC GGAAGACGGC AACCAGAACG TGCTGGTCGG ACAGATTGTC ACCCGCATCT GGCCCGCGGC TACGGGAGAC GCCTCCGTGG ACAAACAGCG TTTTGAACGT GTGGAAGTGC CTTTTACCCT GGAGTTCCAG GGAGACCGCG TCAAGCAGCT GCTGGGGCCG GATACGAAGT TCAAGCGTGA ATCCGGTTCC TGGGGCGGCA TTCTGCTGAA TCTGCTGCCC ATCGTGCTCA TTCTGGTGAT TTTGTTCTTC ATGTTCCGCG CGCAGAGCGG CGGGGCCCGG GGGGCCATGA GCTTCGGCAA AAGCCGGGCG CGCCTCATCT CCCCGGACAA GAACAAGGTG ACGTTCAAGG ATGTGGCCGG TATCAGCGAA GCCAAGGAGG AAGTGTGGGA ACTGGTGGAG TTTCTGCGCA ATCCGGAAAA ATTCCGCGAT CTGGGCGCCA CCATTCCCCG CGGCGTGCTG ATGGTCGGGG CGCCCGGTAC GGGCAAGACT CTGCTGGCGC GTGCCATTGC CGGGGAGTCC AACGCTTCCT TCTATTCCAT CAGCGGCTCG GATTTTGTGG AAATGTTCGT GGGGGTGGGG GCAAGCCGTG TCCGCGATAT GTTTGAACAG GCCAAAAGGA CGGCGCCCAG CCTGATTTTC ATTGATGAAA TTGACGCCGT GGGCCGCCAG CGCGGTTACG GCATGGGCGG CGGCAATGAC GAGCGGGAAC AAACGCTGAA CGCCCTGCTG GTGGAGATGG ACGGTTTTGA AAACAACTCC AATGTAATCG TGATTGCCGC CACCAACCGT GCGGACATTC TGGACCCGGC CCTGCTGCGT CCCGGCCGCT TCGACCGGCA GGTGGTGGTG AACCTGCCGG ACGTCCGGGG GCGCGAACAG ATCCTGCAGG TGCATGCCAG AAAAGTGAAG ATGGCGCCCG GAGTCAGCTT TGAGCGGATT GCCCGCGGCA CGTCCGGCTT TTCCGGTGCC CAGCTGGCCA ACCTGGTCAA TGAAGCCGCC CTGCTGGCCG CCCGCAAGGG GCTGAAGGAG ATTACGGAGG CCGAATTGGA AGAAGCCCGC GACAAGGTCA GCTGGGGGCG TGAACGCCGC AGCCTGGCGA TTAACGAACG GGGGCGCCGC ATTACTGCCG TGCATGAGGC GGGGCATGCC ATCTGCCTGT TGAAAACACC GCACAGCGAG CCGCTGCACC GGGTGACCAT TGTTCCCCGC GGCGGGGCCC TCGGCATGAC CATGTGGCTT CCTTCCGACG ACAAGATGCA CCAGCTCCGG TCCGAAATGC TGGACCAGCT CGTCGTGGCG ATGGGCGGGC GCTGCGCCGA ACAAATCGTT TTTGGTGATG TGACCAGCGG TGCTACCGGA GACATCAAGA GCGCCACCAA CCTGGCGCGG CGCATGGTGT GCGAATTCGG CATGAGCGAA AAACTGGGGC TGATTGAGTA CGGAGAACAC CAGGGAGAAG TTTATATTGC CCGCGACCTG GGGACGCGTT CCCGCAATTA TTCCGAATCC ACGGCGGAGC TGATTGACTC GGAAGTCCGC TTCCTGGTGG ACAGCGCTTA TGAACGCGCC ATGGCCATCC TGACGGAAAA CCGGGACAAG CTGGACATTC TGACGGAGGC CCTGATGGAG TTTGAAACGC TGGAAGGTTC CCAGGTCATG GATATTCTGG AATACGGGGA AATGAAAAAC CCTCCCGCCA GGGTGACTCC GCCCCCCATG CCTTCCGAAG TGGAGGAACA GCCCGGGAAG GATGATTCCG GCCATAACGA GAAGAAAGAA GCTGAAGAGA CCCGCGCGGA CGGCGCTGAA GAACGGAAGA TGGAAGAGGA ACTGGAACAG GCGGAACGGG CCCCCTTCTC CTACAATCCC GTTGATGAGT TCGGCAAGGA CGGCGGAGAA AAGAAATAA
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Protein sequence | MPPSPPRPPK FPGSGRPESP NWGVWVMVLL IVGVLAFGFF TPESFGLGPR KENLESFEAQ YKAGRVVLND PKAPVEVVLS ENGSEGVIHA LVYRKEIQPK VEMTPFALTY SMSLPDRDKP LLNELSGYRV VESPYRTEEG KNVSLIPEGA QKLSVPEFNR LALEGRIAGG KDGIILAEDG NQNVLVGQIV TRIWPAATGD ASVDKQRFER VEVPFTLEFQ GDRVKQLLGP DTKFKRESGS WGGILLNLLP IVLILVILFF MFRAQSGGAR GAMSFGKSRA RLISPDKNKV TFKDVAGISE AKEEVWELVE FLRNPEKFRD LGATIPRGVL MVGAPGTGKT LLARAIAGES NASFYSISGS DFVEMFVGVG ASRVRDMFEQ AKRTAPSLIF IDEIDAVGRQ RGYGMGGGND EREQTLNALL VEMDGFENNS NVIVIAATNR ADILDPALLR PGRFDRQVVV NLPDVRGREQ ILQVHARKVK MAPGVSFERI ARGTSGFSGA QLANLVNEAA LLAARKGLKE ITEAELEEAR DKVSWGRERR SLAINERGRR ITAVHEAGHA ICLLKTPHSE PLHRVTIVPR GGALGMTMWL PSDDKMHQLR SEMLDQLVVA MGGRCAEQIV FGDVTSGATG DIKSATNLAR RMVCEFGMSE KLGLIEYGEH QGEVYIARDL GTRSRNYSES TAELIDSEVR FLVDSAYERA MAILTENRDK LDILTEALME FETLEGSQVM DILEYGEMKN PPARVTPPPM PSEVEEQPGK DDSGHNEKKE AEETRADGAE ERKMEEELEQ AERAPFSYNP VDEFGKDGGE KK
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