Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amuc_0307 |
Symbol | |
ID | 6275078 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Akkermansia muciniphila ATCC BAA-835 |
Kingdom | Bacteria |
Replicon accession | NC_010655 |
Strand | - |
Start bp | 363308 |
End bp | 363781 |
Gene Length | 474 bp |
Protein Length | 157 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 642612361 |
Product | 30S ribosomal protein S7 |
Protein accession | YP_001876930 |
Protein GI | 187734818 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0049] Ribosomal protein S7 |
TIGRFAM ID | [TIGR01029] ribosomal protein S7, bacterial/organelle |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.000000218135 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 62 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTCGCC GTAAACGCGT TTATAGAAAA ATCGAACGTC GTGACCCCCG TTACGACAGC GCTCTTGTTG GCAAACTGAT CAGCAAGGTT ATGCTGGATG GCAAGCGCTC CCTTGCGGAA CGTATTGTTT ATGCCGCTAT TGACATGGCT AACGAAGGCA CGGACAGCAT TGATCCTCTG GAAGTAATCA CCCGCGCCAT TGAAAATGCC AAACCCCGTG TGGAAGTAAA GAGCCGCCGT GTCGGTGGCG CTACTTACCA GGTGCCGCTT GAAGTGGATC CGGCCCGTTC CGAATCCCTG GCTATGCGCT GGATTGTGAA CTACGCCCGC AACCGCAAGG GTGTGCCGAT GCACAAGGCT CTCGCCAACG AAATCAAGGA AGCCGCCAAC AATCAGGGCT CTTCCGTTCG CAAGCGCGAC GACGTTCACA AAATGGCTCA GGCCAACCGC GCCTTTGCCC ATTTCCGCTG GTAA
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Protein sequence | MARRKRVYRK IERRDPRYDS ALVGKLISKV MLDGKRSLAE RIVYAAIDMA NEGTDSIDPL EVITRAIENA KPRVEVKSRR VGGATYQVPL EVDPARSESL AMRWIVNYAR NRKGVPMHKA LANEIKEAAN NQGSSVRKRD DVHKMAQANR AFAHFRW
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