Gene Amuc_0305 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmuc_0305 
Symbol 
ID6275088 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAkkermansia muciniphila ATCC BAA-835 
KingdomBacteria 
Replicon accessionNC_010655 
Strand
Start bp360751 
End bp361059 
Gene Length309 bp 
Protein Length102 aa 
Translation table11 
GC content55% 
IMG OID642612359 
Productribosomal protein S10 
Protein accessionYP_001876928 
Protein GI187734816 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0051] Ribosomal protein S10 
TIGRFAM ID[TIGR01049] ribosomal protein S10, bacterial/organelle 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.33988 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones66 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAAGTC CAAAAATCCG CATTCGACTC CGCGCATTCG ACTACCGCGC CATCGACCGC 
TCCTCCCAGG AGATCGTTGA AACCGCCAAG CGCACCGGAG CCAAAGTTCA CGGCCCGATT
CCGTTGCCGA CCCGTATTGA AAAGTTTTCT GTGAACCGTT CCGTTCACGT CAACAAAAAA
TCGGCTGAAC AGTTTGAAAT CCGCACCCAC AAGCGTCTGC TCGACATCGT CGACCCGACT
GCGCGCACGA TTGATGAGCT CAAGAAGCTT AATCTTCCGG CCGGGGTGGA CATCACGATC
CGCATCTAG
 
Protein sequence
MQSPKIRIRL RAFDYRAIDR SSQEIVETAK RTGAKVHGPI PLPTRIEKFS VNRSVHVNKK 
SAEQFEIRTH KRLLDIVDPT ARTIDELKKL NLPAGVDITI RI