Gene Amuc_0281 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmuc_0281 
Symbol 
ID6275156 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAkkermansia muciniphila ATCC BAA-835 
KingdomBacteria 
Replicon accessionNC_010655 
Strand
Start bp341069 
End bp341374 
Gene Length306 bp 
Protein Length101 aa 
Translation table11 
GC content51% 
IMG OID642612335 
Producthistone family protein DNA-binding protein 
Protein accessionYP_001876904 
Protein GI187734792 
COG category[L] Replication, recombination and repair 
COG ID[COG0776] Bacterial nucleoid DNA-binding protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000000512973 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clones66 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTAAAA CATTAACAAA ACGAGACCTC GTTAACAAAA TCAGCGCCGA AACCAACTTC 
ACTCAGATTG AAGTGTTCGA CATCGTACAG CGTGCCGTGG ACATTATCTC CAGCACCCTT
GCTGAAGGCG ACCGTGTGGT GATTCGCAAT TTCGGAACCT TCCAGGTGAA GGAAGTGAAG
CCCAAAGTAG GCCGCAACCC CAAAAATCCC GACCAGGATG TGCCGATTCC GGCCCGCTCC
GTTGTCAAAT TCAAGGTTGG CAAGGAATTG AAGGATCAGG TCGCCAAGCT GACCGCCTCC
AAGTAA
 
Protein sequence
MAKTLTKRDL VNKISAETNF TQIEVFDIVQ RAVDIISSTL AEGDRVVIRN FGTFQVKEVK 
PKVGRNPKNP DQDVPIPARS VVKFKVGKEL KDQVAKLTAS K