| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amuc_0270 |
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| Symbol | |
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| ID | 6275190 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Akkermansia muciniphila ATCC BAA-835 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010655 |
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| Strand | + |
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| Start bp | 332656 |
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| End bp | 333210 |
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| Gene Length | 555 bp |
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| Protein Length | 184 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 642612325 |
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| Product | Shikimate kinase |
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| Protein accession | YP_001876894 |
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| Protein GI | 187734782 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0703] Shikimate kinase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.000000287272 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 55 |
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| Fosmid unclonability p-value | 0.701055 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAATAGGG CCGCATCAAC ATCCTTGCCA AACATCATCC TGATCGGGCT GATGGGATGC
GGCAAAACTA CCATCGGAAA GGAACTGCAC CGGGAAACGA ACCTTGGTTT TACGGATACG
GACCAGTTAA TCGAACGCCA GACGGGAATG CACATTCCGC AGATTTTCAA AATTCATGGG
GAATCACATT TTCGAGACCT GGAAACCGGA ATCCTGCAAC AGCTTCAGAC GGCCGCCGCA
CAAAGCCGCA TTATTTCCAC AGGAGGAGGC ATCATTATCA GACCGGAAAA CCGGCTGCTA
CTGAAAAAAC TGGGCTTCGT CGTCTGGCTC CATACAGACG TAAACATCCT GTACCAGCGT
ATTTCCAGAT GCACCAACCG CCCCCTGCTC CAACAACCCA ATCCCAAGGC CGTGCTGGAA
CATCTCATGA ATGAACGGCA TGATTTTTAC CAGGAAACGG CGCACTTGAC CATTGATACG
GCCAATCTCC ACATCCATGA AATCGCATTC GGCATTCTGG AATCCGCCAG AGTATTCCGG
TCCCGACGGC AATAA
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| Protein sequence | MNRAASTSLP NIILIGLMGC GKTTIGKELH RETNLGFTDT DQLIERQTGM HIPQIFKIHG
ESHFRDLETG ILQQLQTAAA QSRIISTGGG IIIRPENRLL LKKLGFVVWL HTDVNILYQR
ISRCTNRPLL QQPNPKAVLE HLMNERHDFY QETAHLTIDT ANLHIHEIAF GILESARVFR
SRRQ
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