| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amuc_0254 |
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| Symbol | |
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| ID | 6275254 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Akkermansia muciniphila ATCC BAA-835 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010655 |
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| Strand | - |
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| Start bp | 311770 |
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| End bp | 312705 |
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| Gene Length | 936 bp |
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| Protein Length | 311 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 642612303 |
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| Product | Xylose isomerase domain protein TIM barrel |
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| Protein accession | YP_001876878 |
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| Protein GI | 187734766 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1082] Sugar phosphate isomerases/epimerases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.725233 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 60 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGGTAT TTTCTACGTG CTGGAATTCC CACCGTCATC AGGACGGGGA AGAAATGATT
GATGAGATTC TTTCTTTGGG TTTTGACCAT GTGGAACTTT CCCACGGCAT CAAGTTATCC
CTTCTCCCCG GTATCATGAG GGCGGTAAAA GCCGGAAAGG TGCAGGTGGC CGGGGTGCAT
AATTTTTTTC CCGCTCCGAT TGACGAAGTG GGGGATTCTC CAGACAGCAG GCCTTTTACG
GCGGATTTGC TGCAGGTGCG TTCCAAGGCT ATTGAATTGA CGAAAAAGTC TATTGAACAG
GGCGCAGCAC TGGGGGCCGG ATATATCGTG TTGCATATGG GAACGGTGGA ACCCTTGGCG
AAACGCACGG ATACGGCTCG TTTGCAAAAC CTGGCGCGTC AGGGAATGGT GGGAACGGAA
TCGTTTGCCG GCACCAAGGG CGAATTTGTA CGCCGCCGCA ACCGCCTGGC TCCCGTTTAT
CTGGAACGGG CGCGTGAAGC TCTCCGGCAG CTCCTTCCGC AAGCCGGACA ATTTGGCGTC
AAGCTGGGCA TTGAAGGGCG CAGCCATTAT GAGCAGGTGC CGAGTGAGGA TGAAATGAAT
TTGTTGATGA AGGAGTTTGG AGACAATCCC TTTATTGGTT ACTGGCATGA TTTCGGGCAT
ATTCAAAGAA AGCATAATTT GCTTATATTA AATCATGAGC AGTTTCTTCG CCGAATGTCC
TCCCATTTGA TTGGAGGACA TGTGAACGAC GTCAAATGGC CCGCGCGGGA TCATCAGGTT
CCCCTGCTGG GAGGAGTAGT TCCCTTTGAA CGCCTTCTTC CTTTTTTCCC GCATGGAGTT
CCGCTCGTAT GGGAGCTCTC CAGCCGTGTT TCCTCAGAAG ATATCCGTGC GGCGCGCAAA
TTGTGGATGG AAAAATTTCC GCAGACGCTG GCCTGA
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| Protein sequence | MLVFSTCWNS HRHQDGEEMI DEILSLGFDH VELSHGIKLS LLPGIMRAVK AGKVQVAGVH
NFFPAPIDEV GDSPDSRPFT ADLLQVRSKA IELTKKSIEQ GAALGAGYIV LHMGTVEPLA
KRTDTARLQN LARQGMVGTE SFAGTKGEFV RRRNRLAPVY LERAREALRQ LLPQAGQFGV
KLGIEGRSHY EQVPSEDEMN LLMKEFGDNP FIGYWHDFGH IQRKHNLLIL NHEQFLRRMS
SHLIGGHVND VKWPARDHQV PLLGGVVPFE RLLPFFPHGV PLVWELSSRV SSEDIRAARK
LWMEKFPQTL A
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