| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amuc_0230 |
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| Symbol | |
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| ID | 6275296 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Akkermansia muciniphila ATCC BAA-835 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010655 |
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| Strand | - |
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| Start bp | 288487 |
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| End bp | 289272 |
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| Gene Length | 786 bp |
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| Protein Length | 261 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 642612278 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001876854 |
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| Protein GI | 187734742 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 62 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGGATG TTGATTTTTC CGGCAGTACC GTGGTGGTGA CGGGAGGAGC CTGCGGCATT
GGCCGCGCCA TTGCGGAAGC TTTCGCTGCG GCGGGAGCCC GGGTGGCGGT TTTGGATGTG
AAGCATGAGG AAACGGCCTC CCTGCTGGAG GAATTGCCGG GAGAGGGGCA TCTTTGCGTG
ACGGGCAACG CGGGTGTGGA AGAGGACGTG CGGTCTTTTG CGGAAAAGGT GTTGGAATGT
TTTGGCCGTG TGGATGTGCT GGTAAATAAT GCGTGCATCA CGCGTCGCGG CATTCTTTCC
GGCTGTTCCT TCGAGGAATT CAATGAAGTT TTGCGCGTGG GAGTTTCCGC GCCCTATCTG
CTGAGCCTTT TATTTCGCGA CCATTTTTCC CGCGGCGCTT CCATTGTGAA TATTGCTTCC
ACCCGCGCTT CCATGTCCCA GAAGGATACG GAAAGCTATA GTGCGGCCAA GGGCGCCCTC
ACTTCTTTAA CTCACGCTCT CGCCATGAGC CTTTCCCCTT TCGGCGTTCG TGTGAACAGT
ATCAGTCCAG GCTGGATTGA CACGGGGGTG TTCGGCGTCC TGTCTCCGGA AGATGCTTTT
CAGCATCCTT CCGGGCGCGT CGGTTTGCCG GAAGATATCG TGAAGGCCGT TTTCTTTCTA
TGCGGCTCCA GCTTTGTCAA TGCGGAGAAT CTGGTCATTG ACGGCGGCAT GTCCCGTATG
ATGGTGTACC ACGGAGATGA GGGGTGGTCA TTCCATCCGG AACAGTCGGA CAGCGTTCCC
TCCTGA
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| Protein sequence | MKDVDFSGST VVVTGGACGI GRAIAEAFAA AGARVAVLDV KHEETASLLE ELPGEGHLCV
TGNAGVEEDV RSFAEKVLEC FGRVDVLVNN ACITRRGILS GCSFEEFNEV LRVGVSAPYL
LSLLFRDHFS RGASIVNIAS TRASMSQKDT ESYSAAKGAL TSLTHALAMS LSPFGVRVNS
ISPGWIDTGV FGVLSPEDAF QHPSGRVGLP EDIVKAVFFL CGSSFVNAEN LVIDGGMSRM
MVYHGDEGWS FHPEQSDSVP S
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